RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 HDHD2Q9H0R4 259 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 CDH20Q9HBT6 801 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 ADGRL4Q9HBW9 690 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 DNAJC27Q9NZQ0 273 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 POLR1DQ9Y2S0 133 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 LY6HO94772 140 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 MRPL3P09001 348 aaKnown RBP9.8□□□□□ -0.84
SNX1-204ENST00000559061 PAICSP22234 425 aaKnown RBP9.8□□□□□ -0.84
SNX1-204ENST00000559061 GUCA1AP43080 201 aaPredicted RBP9.8□□□□□ -0.84
SNX1-204ENST00000559061 ART1P52961 327 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 MAD2L1BPQ15013 274 aaPredicted RBP9.8□□□□□ -0.84
SNX1-204ENST00000559061 NXNL2Q5VZ03 156 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 DNM1P46Q6ZS02 220 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 ENTHD1Q8IYW4 607 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 FBXL14Q8N1E6 418 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 DEPDC4Q8N2C3 294 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 GALNT4Q8N4A0 578 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 OR10H5Q8NGA6 315 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 OR6N2Q8NGY6 317 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 OTOSQ8NHW6 89 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 FAM81AQ8TBF8 368 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 SLC25A40Q8TBP6 338 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 RNF133Q8WVZ7 376 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 PIGTQ969N2 578 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 SLAMF6Q96DU3 332 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 PERPQ96FX8 193 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 C4orf45Q96LM5 186 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 ZNF582Q96NG8 517 aaPredicted RBP9.8□□□□□ -0.84
SNX1-204ENST00000559061 SORCS2Q96PQ0 1159 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 ATF6BQ99941 703 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 ABHD6Q9BV23 337 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 OR2J1Q9GZK6 312 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 FAM118AQ9NWS6 357 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 STARD10Q9Y365 291 aa9.8□□□□□ -0.84
SNX1-204ENST00000559061 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 H7C417 338 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 SLC16A6O15403 523 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ENTPD6O75354 484 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 APOL3O95236 402 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 CLIC3O95833 236 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 PTHP01270 115 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ADRA2AP08913 450 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ZNF823P16415 610 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ALOX5APP20292 161 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 OPRL1P41146 370 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 RAD23AP54725 363 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 PRSS12P56730 875 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 PPP1CBP62140 327 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ADARB1P78563 741 aaKnown RBP9.79□□□□□ -0.84
SNX1-204ENST00000559061 HNRNPA0Q13151 305 aaKnown RBP9.79□□□□□ -0.84
SNX1-204ENST00000559061 EIF2B1Q14232 305 aaKnown RBP9.79□□□□□ -0.84
SNX1-204ENST00000559061 SNAI3Q3KNW1 292 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 AGAP6Q5VW22 663 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 LAIR2Q6ISS4 152 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 SPATC1Q76KD6 591 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 MEPCEQ7L2J0 689 aaKnown RBP9.79□□□□□ -0.84
SNX1-204ENST00000559061 SSX6Q7RTT6 188 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 LRRC75A-AS1Q8N1F1 130 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 WFDC11Q8NEX6 87 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 OR8J1Q8NGP2 316 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 OR1J2Q8NGS2 313 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 OR1J1Q8NGS3 322 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ABHD4Q8TB40 342 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 IPCEF1Q8WWN9 437 aaPredicted RBP9.79□□□□□ -0.84
SNX1-204ENST00000559061 PLEKHA8Q96JA3 519 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 C1QTNF5Q9BXJ0 243 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 DCLRE1BQ9H816 532 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 RNPEPL1Q9HAU8 725 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 TBCCD1Q9NVR7 557 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 SMPD3Q9NY59 655 aaPredicted RBP9.79□□□□□ -0.84
SNX1-204ENST00000559061 HAO2Q9NYQ3 351 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ZNF319Q9P2F9 582 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ENOPH1Q9UHY7 261 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 ITGB1BP2Q9UKP3 347 aa9.79□□□□□ -0.84
SNX1-204ENST00000559061 LOC100130705A0A1B0GUX0 176 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 B9A039 149 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 J3QRE1 110 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 MAGEB4O15481 346 aaPredicted RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 LILRA1O75019 489 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 TMCC2O75069 709 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 WBP4O75554 376 aaKnown RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 ABHD16AO95870 558 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 HTR1FP30939 366 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 ALDH3B1P43353 468 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 BLVRAP53004 296 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 SNRPGP62308 76 aaKnown RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 GALK2Q01415 458 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 HLXQ14774 488 aaPredicted RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 SPRNQ5BIV9 151 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 SLC25A30Q5SVS4 291 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 MBNL2Q5VZF2 373 aaKnown RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 RGS7BPQ6MZT1 257 aaPredicted RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 SHFQ7M4L6 423 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 SLC16A9Q7RTY1 509 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 ALDH16A1Q8IZ83 802 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 OR2AJ1Q8NGZ0 328 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 KLF14Q8TD94 323 aaPredicted RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
SNX1-204ENST00000559061 TTTY10Q9BZA0 68 aa9.78□□□□□ -0.84
SNX1-204ENST00000559061 BCL2L14Q9BZR8 327 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms