RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 POLR1DQ9Y2S0 133 aa14.4□□□□□ -0.1
LRRC28-210ENST00000558879 GRIP1Q9Y3R0 1128 aa14.4□□□□□ -0.1
LRRC28-210ENST00000558879 CDH10Q9Y6N8 788 aa14.4□□□□□ -0.1
LRRC28-210ENST00000558879 IDH3BO43837 385 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 KRT36O76013 467 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 TNFAIP6P98066 277 aaPredicted RBP14.39□□□□□ -0.11
LRRC28-210ENST00000558879 SRSF2Q01130 221 aaKnown RBP14.39□□□□□ -0.11
LRRC28-210ENST00000558879 SLC3A1Q07837 685 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 ACSM5Q6NUN0 579 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 CYP2R1Q6VVX0 501 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 FBXW12Q6X9E4 464 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 CFAP77Q6ZQR2 320 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 SDR9C7Q8NEX9 313 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 OR9Q2Q8NGE9 314 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 CCL17Q92583 94 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 RAB1CQ92928 201 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 HAVCR1Q96D42 359 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 CCT8L2Q96SF2 557 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 TRIM15Q9C019 465 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 FN3KQ9H479 309 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 MAGIXQ9H6Y5 334 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 EGLN3Q9H6Z9 239 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 RPRD1BQ9NQG5 326 aaKnown RBP14.39□□□□□ -0.11
LRRC28-210ENST00000558879 DCAF16Q9NXF7 216 aa14.39□□□□□ -0.11
LRRC28-210ENST00000558879 OR6C68A6NDL8 312 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 BHLHE40O14503 412 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 FAM107AO95990 144 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 PNPP00491 289 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 IGHV2-70P01814 119 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 RAC2P15153 192 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 SRP14P37108 136 aaKnown RBP14.38□□□□□ -0.11
LRRC28-210ENST00000558879 HNRNPA0Q13151 305 aaKnown RBP14.38□□□□□ -0.11
LRRC28-210ENST00000558879 RSPO1Q2MKA7 263 aaPredicted RBP14.38□□□□□ -0.11
LRRC28-210ENST00000558879 SLC18B1Q6NT16 456 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 RPL13AP3Q6NVV1 102 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 CORO6Q6QEF8 472 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 COLCA1Q6ZS62 124 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 LINC00471Q8N535 108 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 ZNF283Q8N7M2 679 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 OR8D4Q8NGM9 314 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
LRRC28-210ENST00000558879 CMBLQ96DG6 245 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 DDOQ99489 341 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 PLA2G12AQ9BZM1 189 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 SRA1Q9HD15 236 aaKnown RBP14.38□□□□□ -0.11
LRRC28-210ENST00000558879 PNRC2Q9NPJ4 139 aaKnown RBP14.38□□□□□ -0.11
LRRC28-210ENST00000558879 MRPL22Q9NWU5 206 aaKnown RBP14.38□□□□□ -0.11
LRRC28-210ENST00000558879 IL20Q9NYY1 176 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 IL19Q9UHD0 177 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 FBN3Q75N90 2809 aa14.38□□□□□ -0.11
LRRC28-210ENST00000558879 ANK2Q01484 3957 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 B2RBV5 119 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 ANPEPP15144 967 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 NOS3P29474 1203 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 GGT2P36268 569 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.37□□□□□ -0.11
LRRC28-210ENST00000558879 C1orf229Q6ZS94 237 aaPredicted RBP14.37□□□□□ -0.11
LRRC28-210ENST00000558879 LINC00346Q8IVM7 164 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 OR52L1Q8NGH7 329 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 PTP4A1Q93096 173 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 SIGLEC11Q96RL6 698 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 GAL3ST1Q99999 423 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 C19orf24Q9BVV8 132 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 TMEM106BQ9NUM4 274 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 VNN3Q9NY84 501 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 PTTG3PQ9NZH4 202 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 CYB5R1Q9UHQ9 305 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 NPTNQ9Y639 398 aa14.37□□□□□ -0.11
LRRC28-210ENST00000558879 A0A1B0GWJ7 208 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 TNFRSF11BO00300 401 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 TCF21O43680 179 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 PLPP2O43688 288 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 T-ENOLP0DO92 83 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 TNFRSF1AP19438 455 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 CALB2P22676 271 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 TNFSF4P23510 183 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 CENPAP49450 140 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 SLC36A3Q495N2 470 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 ZNF362Q5T0B9 420 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-210ENST00000558879 RASSF6Q6ZTQ3 369 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-210ENST00000558879 OR2Z1Q8NG97 314 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 OR52E2Q8NGJ4 325 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 ITLN1Q8WWA0 313 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 NSL1Q96IY1 281 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 REPIN1Q9BWE0 567 aaKnown RBP14.36□□□□□ -0.11
LRRC28-210ENST00000558879 C1QTNF5Q9BXJ0 243 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 TMPRSS13Q9BYE2 586 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 KCNG2Q9UJ96 466 aa14.36□□□□□ -0.11
LRRC28-210ENST00000558879 IQCF6A8MYZ5 107 aa14.35□□□□□ -0.11
LRRC28-210ENST00000558879 AVPP01185 164 aa14.35□□□□□ -0.11
LRRC28-210ENST00000558879 ACSM4P0C7M7 580 aa14.35□□□□□ -0.11
LRRC28-210ENST00000558879 RBMXP38159 391 aaKnown RBP14.35□□□□□ -0.11
LRRC28-210ENST00000558879 MS4A2Q01362 244 aa14.35□□□□□ -0.11
LRRC28-210ENST00000558879 TRIM25Q14258 630 aaKnown RBP14.35□□□□□ -0.11
LRRC28-210ENST00000558879 HLXQ14774 488 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-210ENST00000558879 CLEC12AQ5QGZ9 265 aa14.35□□□□□ -0.11
LRRC28-210ENST00000558879 SLC35F1Q5T1Q4 408 aa14.35□□□□□ -0.11
LRRC28-210ENST00000558879 PEG10Q86TG7 708 aaKnown RBP14.35□□□□□ -0.11
LRRC28-210ENST00000558879 SEMA6DQ8NFY4 1073 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms