RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 NDUFAF4Q9P032 175 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 A0A1W2PRQ8 180 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 AHCYL1O43865 530 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 CYB5R3P00387 301 aaPredicted RBP13.09□□□□□ -0.31
TPM1-211ENST00000558314 RHCEP18577 417 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 OMPP47874 163 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 LIMS1P48059 325 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
TPM1-211ENST00000558314 DGCR6Q14129 220 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 C8orf82Q6P1X6 216 aaPredicted RBP13.09□□□□□ -0.31
TPM1-211ENST00000558314 DNM1P34Q6PK57 102 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 DPY19L2P2Q6ZN68 376 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 USP43Q70EL4 1123 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 ADCK1Q86TW2 530 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 LINC00346Q8IVM7 164 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 SIGLECL1Q8N7X8 197 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 CMTM5Q96DZ9 223 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 MRI1Q9BV20 369 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 IFT27Q9BW83 186 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 C1QTNF5Q9BXJ0 243 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
TPM1-211ENST00000558314 ESM1Q9NQ30 184 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 VSX1Q9NZR4 365 aaPredicted RBP13.09□□□□□ -0.31
TPM1-211ENST00000558314 IL19Q9UHD0 177 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 SAMD4AQ9UPU9 718 aaKnown RBP13.09□□□□□ -0.31
TPM1-211ENST00000558314 DYSFO75923 2080 aa13.09□□□□□ -0.31
TPM1-211ENST00000558314 OR6C6A6NF89 314 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 H0YL77 283 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 TRAPPC2LH3BP13 241 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 RENP00797 406 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 HLA-DQA2P01906 255 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 RAC2P15153 192 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 TUBG1P23258 451 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 NOS3P29474 1203 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 RGS6P49758 472 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 ESCO2Q56NI9 601 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 SMARCD3Q6STE5 483 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 HACD2Q6Y1H2 254 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 LRRC28Q86X40 367 aaPredicted RBP13.08□□□□□ -0.32
TPM1-211ENST00000558314 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 OR5L1Q8NGL2 311 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 OR4K13Q8NH42 304 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 ZNF582Q96NG8 517 aaPredicted RBP13.08□□□□□ -0.32
TPM1-211ENST00000558314 NMNAT3Q96T66 252 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 GPA33Q99795 319 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 FN3KQ9H479 309 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 SPAG4Q9NPE6 437 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 OR5V1Q9UGF6 321 aa13.08□□□□□ -0.32
TPM1-211ENST00000558314 TMEM89A2RUT3 159 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 F5H5P2 479 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 DCTN6O00399 190 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 OR10H3O60404 316 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 GADD45GO95257 159 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 CRABP1P29762 137 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 MSX2P35548 267 aaPredicted RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 MMP16P51512 607 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 FXYD6P3P58550 94 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 UBA52P62987 128 aaKnown RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 ZNF154Q13106 437 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 TMEM155Q4W5P6 130 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 MOGAT3Q86VF5 341 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 ZDHHC22Q8N966 263 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 DEFB108BQ8NET1 73 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 GJC3Q8NFK1 279 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 OR8G5Q8NG78 346 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 OR13G1Q8NGZ3 307 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 APOBEC3DQ96AK3 386 aaPredicted RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 MEGF10Q96KG7 1140 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 GPX7Q96SL4 187 aaPredicted RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 PITX2Q99697 317 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 CDADC1Q9BWV3 514 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 GCM1Q9NP62 436 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 DCAF13Q9NV06 445 aaKnown RBP13.07□□□□□ -0.32
TPM1-211ENST00000558314 ZNF69Q9UC07 566 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 NUP50Q9UKX7 468 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 LHFPL6Q9Y693 200 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 TANC2Q9HCD6 1990 aa13.07□□□□□ -0.32
TPM1-211ENST00000558314 CEACAM18A8MTB9 384 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 F5H5K5 113 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 TMEM178BH3BS89 294 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 HLA-DPB1P04440 258 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SELEP16581 610 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SLC6A6P31641 620 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SLC6A9P48067 706 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SRP9P49458 86 aaKnown RBP13.06□□□□□ -0.32
TPM1-211ENST00000558314 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SLC35F1Q5T1Q4 408 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SLC27A4Q6P1M0 643 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 MUC20Q8N307 709 aaPredicted RBP13.06□□□□□ -0.32
TPM1-211ENST00000558314 OR2AJ1Q8NGZ0 328 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 POP5Q969H6 163 aaKnown RBP13.06□□□□□ -0.32
TPM1-211ENST00000558314 MCUR1Q96AQ8 359 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 C7orf34Q96L11 122 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SIGLEC11Q96RL6 698 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms