RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ASH2LQ9UBL3 628 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 GDF2Q9UK05 429 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-223ENST00000557005 OR51B4Q9Y5P0 310 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 R4GMQ9 66 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 A0A0B4J2E0 115 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 A0A1B0GX12 115 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 PRAMEF25A6NGN4 478 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 DBHP09172 617 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 QDPRP09417 244 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 FABP4P15090 132 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 CTHP32929 405 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-223ENST00000557005 PPIAP62937 165 aaKnown RBP4.52□□□□□ -1.69
SYNE2-223ENST00000557005 ADIRFQ15847 76 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 WDR38Q5JTN6 314 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 DMKNQ6E0U4 476 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-223ENST00000557005 PLPP6Q8IY26 295 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF383Q8NA42 475 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 LINC01555Q8NAE3 123 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 CCDC54Q8NEL0 328 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 LHFPL5Q8TAF8 219 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 NT5CQ8TCD5 201 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 NAA11Q9BSU3 229 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-223ENST00000557005 ENY2Q9NPA8 101 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 IL20Q9NYY1 176 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 ZMAT5Q9UDW3 170 aaKnown RBP4.52□□□□□ -1.69
SYNE2-223ENST00000557005 SIGLEC7Q9Y286 467 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 KLHDC2Q9Y2U9 406 aa4.52□□□□□ -1.69
SYNE2-223ENST00000557005 IGHV3-20A0A0C4DH32 117 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CENPVL1A0A0U1RR11 272 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 BLACEA4D250 179 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ALOX12BO75342 701 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ONECUT2O95948 504 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 HNRNPA2B1P22626 353 aaKnown RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CDAP32320 146 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 GSK3AP49840 483 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CST9Q5W186 159 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 RGS7BPQ6MZT1 257 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 USP53Q70EK8 1073 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 C1orf87Q8N0U7 546 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SLC43A2Q8N370 569 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 NKAIN3Q8N8D7 197 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 GPR119Q8TDV5 335 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PIGCQ92535 297 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PELI1Q96FA3 418 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PTGES2Q9H7Z7 377 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 IL23AQ9NPF7 189 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CD207Q9UJ71 328 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 KLK13Q9UKR3 277 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PADI1Q9ULC6 663 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 VSIG4Q9Y279 399 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 LRP12Q9Y561 859 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 TRBV23-1A0A0A0MS06 115 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 OR5K3A6NET4 321 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 METTL12A8MUP2 240 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SEMA4FO95754 770 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 IGHG1P01857 330 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 GLRA1P23415 457 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 MALLQ13021 153 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF74Q16587 644 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 FCRL6Q6DN72 434 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 HSD17B13Q7Z5P4 300 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM123Q8N131 208 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PHYHIPQ92561 330 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 RSC1A1Q92681 617 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 NINJ1Q92982 152 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 WDR34Q96EX3 536 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 POM121Q96HA1 1249 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CMTM3Q96MX0 182 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SLC6A18Q96N87 628 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 TPSD1Q9BZJ3 242 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 S1PR5Q9H228 398 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PRDM7Q9NQW5 492 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CUTCQ9NTM9 273 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 DAPP1Q9UN19 280 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 LTBP4Q8N2S1 1624 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CD300LBA8K4G0 201 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CD14P08571 375 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 DAOP14920 347 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 GALP22466 123 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 DPP4P27487 766 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 NTSR1P30989 418 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 OR3A4PP47883 348 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF136P52737 540 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 TLE4Q04727 773 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 BAXQ07812 192 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 GUCA2BQ16661 112 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 C1orf140Q5VVS0 124 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 LRP11Q86VZ4 500 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 GALNT16Q8N428 558 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 OR51A4Q8NGJ6 313 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 OR51A2Q8NGJ7 313 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 OR13C8Q8NGS7 320 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF775Q96BV0 537 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SCMH1Q96GD3 660 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 OCSTAMPQ9BR26 566 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SCPEP1Q9HB40 452 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CHST11Q9NPF2 352 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 FRRS1LQ9P0K9 344 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms