RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SLC25A40Q8TBP6 338 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 TWIST2Q8WVJ9 160 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 DYDC1Q8WWB3 177 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 SLC38A4Q969I6 547 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 TMEM54Q969K7 222 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 SLC41A3Q96GZ6 507 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 TBX15Q96SF7 602 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 B9D2Q9BPU9 175 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 PCGF1Q9BSM1 259 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 OR2J1Q9GZK6 312 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 MEAF6Q9HAF1 191 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 TMEM38BQ9NVV0 291 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 GLTPQ9NZD2 209 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 KIF17Q9P2E2 1029 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 EIF3KQ9UBQ5 218 aaKnown RBP5.65□□□□□ -1.5
ATXN3-236ENST00000556220 PPP1R3CQ9UQK1 317 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 ARL2BPQ9Y2Y0 163 aa5.65□□□□□ -1.5
ATXN3-236ENST00000556220 STAB2Q8WWQ8 2551 aa5.65□□□□□ -1.51
ATXN3-236ENST00000556220 STARD9Q9P2P6 4700 aa5.65□□□□□ -1.51
ATXN3-236ENST00000556220 TRAV36DV7A0A075B6V5 113 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 IGHV1-69DA0A0B4J2H0 117 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 A0A0U1RQK1 487 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 WI2-2373I1.2A0A1W2PRP0 233 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF879B4DU55 563 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 E9PBE3 544 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 RNASEK-C17orf49H0YIS7 233 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 H3BSA7 217 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 IFNL4K9M1U5 179 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 FXYD1O00168 92 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 IGHV1-69P01742 117 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 MMP7P09237 267 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-236ENST00000556220 NR2F1P10589 423 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 G6PDP11413 515 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 MMP9P14780 707 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 NQO1P15559 274 aaKnown RBP5.64□□□□□ -1.51
ATXN3-236ENST00000556220 STOMP27105 288 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 SDHAP31040 664 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 GABRA5P31644 462 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 PITPNBP48739 271 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 TXNL4AP83876 142 aaKnown RBP5.64□□□□□ -1.51
ATXN3-236ENST00000556220 HSF2Q03933 536 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 EMX1Q04741 257 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-236ENST00000556220 PUDPQ08623 228 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 PSG7Q13046 419 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 RNF220Q5VTB9 566 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 WDR25Q64LD2 544 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-236ENST00000556220 C8orf82Q6P1X6 216 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF836Q6ZNA1 936 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 TRPM8Q7Z2W7 1104 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 PXKQ7Z7A4 578 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 CPLX4Q7Z7G2 160 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 SERPINA11Q86U17 422 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 ANKRD46Q86W74 232 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 C10orf111Q8N326 155 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 SCAIQ8N9R8 606 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 RBM15BQ8NDT2 890 aaKnown RBP5.64□□□□□ -1.51
ATXN3-236ENST00000556220 HIPK4Q8NE63 616 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 WFDC9Q8NEX5 89 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 OR8J2Q8NGG1 315 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 OR8B3Q8NGG8 313 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 OR6S1Q8NH40 331 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 OR52P1PQ8NH57 321 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 OR6X1Q8NH79 312 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 ITLN1Q8WWA0 313 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 POM121L2Q96KW2 1035 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 OR8B2Q96RD0 313 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 TMEM246Q9BRR3 403 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 TOR3AQ9H497 397 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 C12orf10Q9HB07 376 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 CLN8Q9UBY8 286 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 IL19Q9UHD0 177 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 FOXJ3Q9UPW0 622 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 CHST2Q9Y4C5 530 aa5.64□□□□□ -1.51
ATXN3-236ENST00000556220 CSMD3Q7Z407 3707 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 IGKV1D-42A0A075B6H8 117 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 LOC100509620A0A075B734 347 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 C5orf49A4QMS7 147 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 PLPP3O14495 311 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 PHYHO14832 338 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 SURF4O15260 269 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 HDAC3O15379 428 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 ENSAO43768 121 aaKnown RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 TIMM8AO60220 97 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 TOX4O94842 621 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 FSTL3O95633 263 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 LIPFP07098 398 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 SLC6A2P23975 617 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 RPL14P50914 215 aaKnown RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 EFNB2P52799 333 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 BIDP55957 195 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 PPP1CBP62140 327 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 HOXC5Q00444 222 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 MAPK11Q15759 364 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 NSUN5P1Q3KNT7 163 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 PABPC1L2AQ5JQF8 200 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 ANXA8L1Q5VT79 327 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 C11orf88Q6PI97 169 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF841Q6ZN19 808 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 Q6ZR03 302 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 ZER1Q7Z7L7 766 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms