RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 TSPAN31Q12999 210 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 HIST2H3PS2Q5TEC6 136 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 FAHD2BQ6P2I3 314 aaPredicted RBP11.69□□□□□ -0.54
PCNX4-209ENST00000555569 SHQ1Q6PI26 577 aaKnown RBP11.69□□□□□ -0.54
PCNX4-209ENST00000555569 ZNF620Q6ZNG0 422 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 Q6ZR03 302 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 HIST2H3AQ71DI3 136 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 PEG10Q86TG7 708 aaKnown RBP11.69□□□□□ -0.54
PCNX4-209ENST00000555569 OR6V1Q8N148 313 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 OR2Z1Q8NG97 314 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 PTP4A1Q93096 173 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 FAHD2AQ96GK7 314 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 COQ7Q99807 217 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 HDHD2Q9H0R4 259 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 METTL17Q9H7H0 456 aaPredicted RBP11.69□□□□□ -0.54
PCNX4-209ENST00000555569 RPRD1BQ9NQG5 326 aaKnown RBP11.69□□□□□ -0.54
PCNX4-209ENST00000555569 G6PC2Q9NQR9 355 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 FBN3Q75N90 2809 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 KRT36O76013 467 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 PNPP00491 289 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 RAC2P15153 192 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 TNFRSF1AP19438 455 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 ERFP50548 548 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 COX10Q12887 443 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 SLC36A3Q495N2 470 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 PGBD2Q6P3X8 592 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 CORO6Q6QEF8 472 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 CYP2R1Q6VVX0 501 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 SDR9C7Q8NEX9 313 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 SLC26A10Q8NG04 563 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 OR5L1Q8NGL2 311 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 ITLN1Q8WWA0 313 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 APOBEC3DQ96AK3 386 aaPredicted RBP11.68□□□□□ -0.54
PCNX4-209ENST00000555569 DCAF16Q9NXF7 216 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 PTTG3PQ9NZH4 202 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 ACTR3BQ9P1U1 418 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 NPTNQ9Y639 398 aa11.68□□□□□ -0.54
PCNX4-209ENST00000555569 B2RBV5 119 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 SURF4O15260 269 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 IGHV2-70P01814 119 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 ATP6V1B2P21281 511 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 HMGA2P52926 109 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 DBPQ10586 325 aaPredicted RBP11.67□□□□□ -0.54
PCNX4-209ENST00000555569 SCGB2A2Q13296 93 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 HLXQ14774 488 aaPredicted RBP11.67□□□□□ -0.54
PCNX4-209ENST00000555569 SLC35F1Q5T1Q4 408 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 FBXW12Q6X9E4 464 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 ZNF771Q7L3S4 317 aaPredicted RBP11.67□□□□□ -0.54
PCNX4-209ENST00000555569 ZBTB46Q86UZ6 589 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 LINC00346Q8IVM7 164 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 OR5AS1Q8N127 324 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 ZNF283Q8N7M2 679 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 OR9Q2Q8NGE9 314 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 OR52E2Q8NGJ4 325 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 FN3KQ9H479 309 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 TMEM106BQ9NUM4 274 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 UBAP1Q9NZ09 502 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 IL19Q9UHD0 177 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 LYVE1Q9Y5Y7 322 aa11.67□□□□□ -0.54
PCNX4-209ENST00000555569 A0A0G2JMP0 313 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 A0A0X1KG70 313 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 OR6C68A6NDL8 312 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 TNFRSF11BO00300 401 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 HLA-DQA2P01906 255 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 SBK2P0C263 348 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.66□□□□□ -0.54
PCNX4-209ENST00000555569 HNRNPA0Q13151 305 aaKnown RBP11.66□□□□□ -0.54
PCNX4-209ENST00000555569 CLEC12AQ5QGZ9 265 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 DCAF12L2Q5VW00 463 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 OR2T2Q6IF00 324 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 SLC18B1Q6NT16 456 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 RPL13AP3Q6NVV1 102 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 CFAP77Q6ZQR2 320 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
PCNX4-209ENST00000555569 ARHGAP24Q8N264 748 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 LINC00471Q8N535 108 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 FITM2Q8N6M3 262 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 ATG16L2Q8NAA4 619 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 OR4M2Q8NGB6 313 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 OR52L1Q8NGH7 329 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 OR2AJ1Q8NGZ0 328 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 ST7LQ8TDW4 575 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 NSL1Q96IY1 281 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 CCT8L2Q96SF2 557 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 PITX2Q99697 317 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 BTBD10Q9BSF8 475 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 CDADC1Q9BWV3 514 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 TMPRSS13Q9BYE2 586 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 TRIM15Q9C019 465 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 EGLN3Q9H6Z9 239 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 CDH10Q9Y6N8 788 aa11.66□□□□□ -0.54
PCNX4-209ENST00000555569 DOCK11Q5JSL3 2073 aa11.65□□□□□ -0.54
PCNX4-209ENST00000555569 LOC105371242A0A075B767 164 aa11.65□□□□□ -0.54
PCNX4-209ENST00000555569 A0A0A6YYJ9 748 aa11.65□□□□□ -0.54
PCNX4-209ENST00000555569 TCRBV5S2A0A599 114 aa11.65□□□□□ -0.54
PCNX4-209ENST00000555569 J3QLI3 93 aa11.65□□□□□ -0.54
PCNX4-209ENST00000555569 CCNB2O95067 398 aa11.65□□□□□ -0.54
PCNX4-209ENST00000555569 AVPP01185 164 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms