RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 C10orf107Q8IVU9 208 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 CLIP4Q8N3C7 705 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 GALNT4Q8N4A0 578 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 TRIML2Q8N7C3 387 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 SCAIQ8N9R8 606 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 OR6S1Q8NH40 331 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 KLF14Q8TD94 323 aaPredicted RBP4□□□□□ -1.77
ATXN3-232ENST00000555381 GEMIN6Q8WXD5 167 aaKnown RBP4□□□□□ -1.77
ATXN3-232ENST00000555381 IFT81Q8WYA0 676 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 TMEM54Q969K7 222 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 SLC35B4Q969S0 331 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 SPSB4Q96A44 273 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 TUBGCP3Q96CW5 907 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 SLC41A3Q96GZ6 507 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 C3orf30Q96M34 536 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 MAGEB18Q96M61 343 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 SH3GL3Q99963 347 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 SLC35A5Q9BS91 424 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 THAP7Q9BT49 309 aaPredicted RBP4□□□□□ -1.77
ATXN3-232ENST00000555381 TMEM165Q9HC07 324 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 DCAF16Q9NXF7 216 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 GLTPQ9NZD2 209 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 CALML5Q9NZT1 146 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 KIF17Q9P2E2 1029 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 RPS6KB2Q9UBS0 482 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 TBK1Q9UHD2 729 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 IFT52Q9Y366 437 aa4□□□□□ -1.77
ATXN3-232ENST00000555381 ZNF816-ZNF321PA0A0X1KG74 233 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 LOC100653049A0A140TA62 436 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 A0A1W2PPM1 405 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 H0YL77 283 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 H3BSA7 217 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 IFNL4K9M1U5 179 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 P2RY10O00398 339 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 PLPP3O14495 311 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 SURF4O15260 269 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 KRT34O76011 436 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 KRT75O95678 551 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 LIPFP07098 398 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 CHRNGP07510 517 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 CBLP22681 906 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 STOMP27105 288 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 MPV17P39210 176 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 IER3P46695 156 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 GDI2P50395 445 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 BIDP55957 195 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 FGF12P61328 243 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 GNB2P62879 340 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 HSF2Q03933 536 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 PUDPQ08623 228 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 HERPUD1Q15011 391 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 MAPK11Q15759 364 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 SMU1Q2TAY7 513 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 MTX3Q5HYI7 312 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 SPATA46Q5T0L3 261 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 ZNF774Q6NX45 483 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 C8orf74Q6P047 294 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 ZNF621Q6ZSS3 439 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 TRMT10CQ7L0Y3 403 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 SERPINA11Q86U17 422 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 KLBQ86Z14 1044 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 LRRC34Q8IZ02 419 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 LSMEM1Q8N8F7 131 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 RBM15BQ8NDT2 890 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 OR4K5Q8NGD3 323 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 OR6X1Q8NH79 312 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 RP9Q8TA86 221 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 VANGL1Q8TAA9 524 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 SLC25A40Q8TBP6 338 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 DNAJA4Q8WW22 397 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 IPCEF1Q8WWN9 437 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 CCDC115Q96NT0 180 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 SIGLEC11Q96RL6 698 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 FMO2Q99518 471 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 EPYCQ99645 322 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 ARHGDIGQ99819 225 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 RHOXF2Q9BQY4 288 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 NUDT16L1Q9BRJ7 211 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 TRIM15Q9C019 465 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 OR2J1Q9GZK6 312 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 KCNN2Q9H2S1 579 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 DPAGT1Q9H3H5 408 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 CACYBPQ9HB71 228 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 MAN2C1Q9NTJ4 1040 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 ACOXLQ9NUZ1 547 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 ASIC5Q9NY37 505 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 MRPL39Q9NYK5 338 aaKnown RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 PSMC3IPQ9P2W1 217 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 IL19Q9UHD0 177 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 BTNL2Q9UIR0 455 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 PPP1R3CQ9UQK1 317 aa3.99□□□□□ -1.77
ATXN3-232ENST00000555381 ZNF443Q9Y2A4 671 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-232ENST00000555381 IGKV1D-42A0A075B6H8 117 aa3.98□□□□□ -1.77
ATXN3-232ENST00000555381 A0A0G2JPF8 293 aa3.98□□□□□ -1.77
ATXN3-232ENST00000555381 CENPVL3A0A0U1RRI6 287 aa3.98□□□□□ -1.77
ATXN3-232ENST00000555381 LOC102723971A0A1B0GUV8 181 aa3.98□□□□□ -1.77
ATXN3-232ENST00000555381 C5orf49A4QMS7 147 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms