RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PRR23D2P0DMB1 279 aaPredicted RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 ENTPD1P49961 510 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 DBPQ10586 325 aaPredicted RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 TAF13Q15543 124 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 PCGF3Q3KNV8 242 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 MBNL2Q5VZF2 373 aaKnown RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 DNM1P46Q6ZS02 220 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 MAPK1IP1LQ8NDC0 245 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 KLF14Q8TD94 323 aaPredicted RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 UBASH3BQ8TF42 649 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 SLC7A6Q92536 515 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 SPTSSAQ969W0 71 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 MARS2Q96GW9 593 aaKnown RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 ATF6BQ99941 703 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 SMR3AQ99954 134 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 GSX1Q9H4S2 264 aaPredicted RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 NTN4Q9HB63 628 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 CYSLTR2Q9NS75 346 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 DECR2Q9NUI1 292 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 MRPL22Q9NWU5 206 aaKnown RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 CGGBP1Q9UFW8 167 aaPredicted RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 CYB5R1Q9UHQ9 305 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 COMMD3-BMI1R4GMX3 469 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 CR1P17927 2039 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 FAM183AA6NL82 134 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 F5H5K5 113 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 NGFP01138 241 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 IGHV3-13P01766 116 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 HEXAP06865 529 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 DBHP09172 617 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 GGT2P36268 569 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 LIPAP38571 399 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 MPV17P39210 176 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 SLC6A9P48067 706 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 ZNF81P51508 661 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 RPS7P62081 194 aaKnown RBP10.36□□□□□ -0.75
SRP54-206ENST00000555317 GGTLC2Q14390 218 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 ZFP1Q6P2D0 407 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 FAHD1Q6P587 224 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 CFAP77Q6ZQR2 320 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 AMIGO2Q86SJ2 522 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 PARP8Q8N3A8 854 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 PYDC1Q8WXC3 89 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 LRTOMTQ8WZ04 291 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 APOBEC3DQ96AK3 386 aaPredicted RBP10.36□□□□□ -0.75
SRP54-206ENST00000555317 DUS3LQ96G46 650 aaKnown RBP10.36□□□□□ -0.75
SRP54-206ENST00000555317 CENPNQ96H22 339 aaPredicted RBP10.36□□□□□ -0.75
SRP54-206ENST00000555317 DDOQ99489 341 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 COPS4Q9BT78 406 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 NMNAT2Q9BZQ4 307 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 OR51V1Q9H2C8 321 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 SEMA6AQ9H2E6 1030 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 MED20Q9H944 212 aa10.36□□□□□ -0.75
SRP54-206ENST00000555317 C17orf100A8MU93 164 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ZNF593O00488 134 aaPredicted RBP10.35□□□□□ -0.75
SRP54-206ENST00000555317 SURF4O15260 269 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 LY6G6DO95868 133 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 CLUP10909 449 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 USF1P22415 310 aaPredicted RBP10.35□□□□□ -0.75
SRP54-206ENST00000555317 IGFBP5P24593 272 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 GSTT1P30711 240 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 DAPP51397 102 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 CRISP1P54107 249 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 TPTEP56180 551 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ACTR3P61158 418 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ESRRGP62508 458 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 HIST1H3AP68431 136 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 MALLQ13021 153 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 KPNB1Q14974 876 aaKnown RBP10.35□□□□□ -0.75
SRP54-206ENST00000555317 SNAPC1Q16533 368 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 KLHL12Q53G59 568 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ZNF362Q5T0B9 420 aaPredicted RBP10.35□□□□□ -0.75
SRP54-206ENST00000555317 HIST2H3PS2Q5TEC6 136 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ACSM5Q6NUN0 579 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 PLBD1Q6P4A8 553 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 HIST2H3AQ71DI3 136 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 Q71RC1 249 aaPredicted RBP10.35□□□□□ -0.75
SRP54-206ENST00000555317 DCXRQ7Z4W1 244 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ERI1Q8IV48 349 aaKnown RBP10.35□□□□□ -0.75
SRP54-206ENST00000555317 ZNF786Q8N393 782 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ZNF511Q8NB15 262 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 OR6N2Q8NGY6 317 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 RDH5Q92781 318 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 INTS14Q96SY0 518 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 EGLN1Q9GZT9 426 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 GABARAPL1Q9H0R8 117 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 WDR76Q9H967 626 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 SLC25A19Q9HC21 320 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 TVP23BQ9NYZ1 205 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 PTTG3PQ9NZH4 202 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 ORC6Q9Y5N6 252 aa10.35□□□□□ -0.75
SRP54-206ENST00000555317 NAV3Q8IVL0 2385 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 M0R135 149 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 PRODHO43272 600 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 SPRY3O43610 288 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 GLCEO94923 617 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 LCATP04180 440 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 TNFSF4P23510 183 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 RPS27P42677 84 aaKnown RBP10.34□□□□□ -0.75
SRP54-206ENST00000555317 NR4A2P43354 598 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms