RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SHISA9B4DS77 424 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 F5H5K5 113 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 J3QRE1 110 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 J3QW42 95 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 DENRO43583 198 aaKnown RBP12.35□□□□□ -0.43
CHD8-208ENST00000555301 ICMTO60725 284 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 ZNF254O75437 659 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 ABHD16AO95870 558 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 APOC1P02654 83 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 H2BFMP0C1H6 154 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 NR4A1P22736 598 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 HSD11B1P28845 292 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 OPRL1P41146 370 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 RAD52P43351 418 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 RGS6P49758 472 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 TPTEP56180 551 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 RPS23P62266 143 aaKnown RBP12.35□□□□□ -0.43
CHD8-208ENST00000555301 ROM1Q03395 351 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 KRTAP27-1Q3LI81 207 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 ZNF672Q499Z4 452 aaPredicted RBP12.35□□□□□ -0.43
CHD8-208ENST00000555301 C6orf141Q5SZD1 244 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 ZNF322Q6U7Q0 402 aaPredicted RBP12.35□□□□□ -0.43
CHD8-208ENST00000555301 SPATC1Q76KD6 591 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 KRT77Q7Z794 578 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 PAQR4Q8N4S7 273 aaPredicted RBP12.35□□□□□ -0.43
CHD8-208ENST00000555301 ACBD7Q8N6N7 88 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 BPIFB6Q8NFQ5 453 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 KBTBD8Q8NFY9 601 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 C4orf45Q96LM5 186 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 AMELYQ99218 206 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 KCNJ15Q99712 375 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 BCL2L14Q9BZR8 327 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 NIPAL2Q9H841 368 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 TBCCD1Q9NVR7 557 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 CNOT2Q9NZN8 540 aaKnown RBP12.35□□□□□ -0.43
CHD8-208ENST00000555301 KLHDC2Q9Y2U9 406 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 GRIP1Q9Y3R0 1128 aa12.35□□□□□ -0.43
CHD8-208ENST00000555301 A0A1W2PQL4 384 aaPredicted RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 DAPL1A0PJW8 107 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 EFCAB10A6NFE3 127 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 M0R135 149 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 PLAUP00749 431 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 DBHP09172 617 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 DCKP27707 260 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 GLRXP35754 106 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 UCP2P55851 309 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 HGFACQ04756 655 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 SNTB2Q13425 540 aaKnown RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 LAIR2Q6ISS4 152 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 DRAM2Q6UX65 266 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 LRRN1Q6UXK5 716 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 ZNF679Q8IYX0 411 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 OR52I1Q8NGK6 324 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 SLC7A6Q92536 515 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 AKAP1Q92667 903 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHD8-208ENST00000555301 MRPL48Q96GC5 212 aaKnown RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 ZNF799Q96GE5 643 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 COG8Q96MW5 612 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 OR8B4Q96RC9 309 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 TBX5Q99593 518 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 SP140LQ9H930 580 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 FGF20Q9NP95 211 aaPredicted RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 CA10Q9NS85 328 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 SCN3BQ9NY72 215 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 CISD1Q9NZ45 108 aaKnown RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 IKZF2Q9UKS7 526 aa12.34□□□□□ -0.43
CHD8-208ENST00000555301 SPTAN1Q13813 2472 aaKnown RBP12.34□□□□□ -0.43
CHD8-208ENST00000555301 XPNPEP2O43895 674 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 SMPD2O60906 423 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 FAM20BO75063 409 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 IGHA1P01876 353 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 KRT8P05787 483 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 CCDC159P0C7I6 412 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 ACSM4P0C7M7 580 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 TUBG1P23258 451 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 DCTDP32321 178 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 WNT5AP41221 380 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 PRKXP51817 358 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 RIDAP52758 137 aaKnown RBP12.33□□□□□ -0.44
CHD8-208ENST00000555301 NKX6-1P78426 367 aaPredicted RBP12.33□□□□□ -0.44
CHD8-208ENST00000555301 MED21Q13503 144 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 RSPO1Q2MKA7 263 aaPredicted RBP12.33□□□□□ -0.44
CHD8-208ENST00000555301 ZNF544Q6NX49 715 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 ZNF283Q8N7M2 679 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 LILRB1Q8NHL6 650 aaPredicted RBP12.33□□□□□ -0.44
CHD8-208ENST00000555301 SNX33Q8WV41 574 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 GGHQ92820 318 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 FBXW5Q969U6 566 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 APOBEC3DQ96AK3 386 aaPredicted RBP12.33□□□□□ -0.44
CHD8-208ENST00000555301 JAM3Q9BX67 310 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 ZNF442Q9H7R0 627 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 TUBG2Q9NRH3 451 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 SLCO1C1Q9NYB5 712 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 PSORS1C1Q9UIG5 152 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 MYRFQ9Y2G1 1151 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms