RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DOPEY1Q5JWR5 2465 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 C5orf63A6NC05 138 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 CCRL2O00421 344 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 PHYHO14832 338 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 TMCC2O75069 709 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 CST2P09228 141 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 MMP7P09237 267 aaPredicted RBP9.39□□□□□ -0.91
TDP1-211ENST00000555178 SLC2A1P11166 492 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 CPEP16870 476 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 PSG4Q00888 419 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 SLC3A1Q07837 685 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 SFRP5Q5T4F7 317 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 TMEM211Q6ICI0 200 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 FAM220AQ7Z4H9 259 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 PRSS35Q8N3Z0 413 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 ITLN2Q8WWU7 325 aaPredicted RBP9.39□□□□□ -0.91
TDP1-211ENST00000555178 ASB17Q8WXJ9 295 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 UFD1Q92890 307 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 PGLYRP3Q96LB9 341 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 TMED9Q9BVK6 235 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 MROQ9BYG7 248 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 WNT5BQ9H1J7 359 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 PLEK2Q9NYT0 353 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 GTF2A1LQ9UNN4 478 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 SLC22A13Q9Y226 551 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 ROS1P08922 2347 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 MSTNO14793 375 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 SULT1C4O75897 302 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 CELA3BP08861 270 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 H2BFMP0C1H6 154 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 MAGEB1P43366 347 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 PRKXP51817 358 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 HIST1H3AP68431 136 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 GALK2Q01415 458 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 HGFACQ04756 655 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 CDK5R1Q15078 307 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 RSPO1Q2MKA7 263 aaPredicted RBP9.38□□□□□ -0.91
TDP1-211ENST00000555178 TBRG1Q3YBR2 411 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 ALKBH2Q6NS38 261 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 KCTD18Q6PI47 426 aaPredicted RBP9.38□□□□□ -0.91
TDP1-211ENST00000555178 HIST2H3AQ71DI3 136 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 ZNF627Q7L945 461 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 NAA40Q86UY6 237 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 MS4A3Q96HJ5 214 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 OR2H1Q9GZK4 316 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 NDUFB11Q9NX14 153 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 FRRS1LQ9P0K9 344 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 N6AMT1Q9Y5N5 214 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 ICE1Q9Y2F5 2266 aa9.38□□□□□ -0.91
TDP1-211ENST00000555178 ZNF878C9JN71 531 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 SRSF10O75494 262 aaKnown RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 FARS2O95363 451 aaKnown RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 CD79AP11912 226 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 CCL2P13500 99 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 KIR3DL2P43630 455 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 RIDAP52758 137 aaKnown RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 GBX2P52951 348 aaPredicted RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 ACSM1Q08AH1 577 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 TPBGQ13641 420 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 PABPC1L2AQ5JQF8 200 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 WDR38Q5JTN6 314 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 DMKNQ6E0U4 476 aaPredicted RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 MRGPRGQ86SM5 289 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 P2RY8Q86VZ1 359 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ZNF584Q8IVC4 421 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 RDH10Q8IZV5 341 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 CPEB3Q8NE35 698 aaKnown RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 GJC3Q8NFK1 279 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 LILRB4Q8NHJ6 448 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 S100PBPQ96BU1 408 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ISOC1Q96CN7 298 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ZNF75AQ96N20 296 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ATF6BQ99941 703 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 CHCHD6Q9BRQ6 235 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 BATF3Q9NR55 127 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 SF3B6Q9Y3B4 125 aaKnown RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 TRBV2A0A0J9YWF9 115 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 LOC100506127A0A0U1RQW1 187 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 A0A1B0GUH1 482 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 CIB4A0PJX0 185 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 F5H5K5 113 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 C19orf84I3L1E1 186 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 SGCEO43556 437 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 SYNGR3O43761 229 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 GPX5O75715 221 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ZFPL1O95159 310 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 CHRNB4P30926 498 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 GDI2P50395 445 aaKnown RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 NCS1P62166 190 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 TFF3Q07654 80 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 STK11Q15831 433 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 CTF1Q16619 201 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ELFN2Q5R3F8 820 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ANKRD16Q6P6B7 361 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 BEND4Q6ZU67 534 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 BHLHA15Q7RTS1 189 aaPredicted RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 ABHD12BQ7Z5M8 362 aaPredicted RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 OR2G2Q8NGZ5 317 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms