RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SRP9P49458 86 aaKnown RBP6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TEKQ02763 1124 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 PFN4Q8NHR9 129 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 GHSRQ92847 366 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 TMIGD2Q96BF3 282 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF416Q9BWM5 594 aa6.31□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1W2PRD5 423 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1W2PRF3 423 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1W2PRM7 423 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TNFSF8P32971 234 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 CD200P41217 278 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 RBP2P50120 134 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 DEFB123Q8N688 67 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ANKLE1Q8NAG6 615 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 OR6S1Q8NH40 331 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 OLIG1Q8TAK6 271 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 SLCO2A1Q92959 643 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 C8orf44Q96CB5 159 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 LOXL2Q9Y4K0 774 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 CSAG2Q9Y5P2 127 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 DNAJC15Q9Y5T4 150 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 KLK10O43240 276 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PROX2Q3B8N5 592 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 HENMT1Q5T8I9 393 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF787Q6DD87 383 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TGIF2LYQ8IUE0 185 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 KCNRGQ8N5I3 272 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TAF9BQ9HBM6 251 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 DOK5Q9P104 306 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 RGPD1P0DJD0 1748 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 KIDINS220Q9ULH0 1771 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TRIM23P36406 574 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF511Q8NB15 262 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 CENPOQ9BU64 300 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 MSL2Q9HCI7 577 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM9BQ9NQ34 198 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 BMPR1BO00238 502 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ABCD3P28288 659 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 SULT1A2P50226 295 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 MS4A2Q01362 244 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 NHLH1Q02575 133 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 NHLH2Q02577 135 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 HTR4Q13639 388 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PCK2Q16822 640 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM207Q6UWW9 146 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PLPP6Q8IY26 295 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 OR6K3Q8NGY3 331 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 DCAF13Q9NV06 445 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TEX50A0A1B0GTY4 177 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 MYOGP15173 224 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 B4GALT1P15291 398 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 FOXA1P55317 472 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ERVFC1-1P60608 527 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 OR5M8Q8NGP6 311 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 KISS1RQ969F8 398 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 C12orf42Q96LP6 360 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF2Q9BSG1 426 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 EMC6Q9BV81 110 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PLA2G12AQ9BZM1 189 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 AKIRIN1Q9H9L7 192 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 FBXL4Q9UKA2 621 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 CCL26Q9Y258 94 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 COL14A1Q05707 1796 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 IGKV6D-41A0A0C4DH26 115 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF320A2RRD8 509 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 HSD17B1P14061 328 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF83P51522 516 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 CORO6Q6QEF8 472 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ERGIC1Q969X5 290 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 GPR78Q96P69 363 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 B3GALT5Q9Y2C3 310 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 WASHC3Q9Y3C0 194 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 FAM208AQ9UK61 1670 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TLCD2A6NGC4 264 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 CDC14BO60729 498 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 FGF4P08620 206 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TRA2BP62995 288 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ALKBH1Q13686 389 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 LRRTM3Q86VH5 581 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 OR13C5Q8NGS8 318 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 SLC46A1Q96NT5 459 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 SMIM14Q96QK8 99 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF576Q9H609 170 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZDHHC11Q9H8X9 412 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 FGF21Q9NSA1 209 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 TCFL5Q9UL49 500 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 HRH3Q9Y5N1 445 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 C3P01024 1663 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 WDR1O75083 606 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 CPN1P15169 458 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PMP22Q01453 160 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 YOD1Q5VVQ6 348 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 RANBP10Q6VN20 620 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 Q6ZPB1 254 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 OR5K2Q8NHB8 316 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 SPACA5Q96QH8 159 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PTDSS2Q9BVG9 487 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 RGPD5Q99666 1765 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms