RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
SHMT2-211ENST00000554310 CDH10Q9Y6N8 788 aa11.22□□□□□ -0.61
SHMT2-211ENST00000554310 IGLV3-9A0A075B6K5 115 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 C5orf49A4QMS7 147 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 CCDC160A6NGH7 325 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 H3BSA7 217 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 IDH3BO43837 385 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 SLC16A7O60669 478 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 LCKP06239 509 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 IGFBP1P08833 259 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF250P15622 560 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 EEF1B2P24534 225 aaKnown RBP11.21□□□□□ -0.61
SHMT2-211ENST00000554310 CRABP1P29762 137 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 KLF3P57682 345 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-211ENST00000554310 TEKQ02763 1124 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 AQP6Q13520 282 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 MAD2L1BPQ15013 274 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF770Q6IQ21 691 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF774Q6NX45 483 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 PTCHD4Q6ZW05 846 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 KCTD8Q6ZWB6 473 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 GLB1L2Q8IW92 636 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 C1orf174Q8IYL3 243 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF540Q8NDQ6 660 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 OR52L1Q8NGH7 329 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 AKR7LQ8NHP1 331 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 SYNPRQ8TBG9 265 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 C11orf40Q8WZ69 217 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 TMIGD2Q96BF3 282 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 ERMAPQ96PL5 475 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-211ENST00000554310 NUAK2Q9H093 628 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 OR51B6Q9H340 312 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF556Q9HAH1 456 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 EMC7Q9NPA0 242 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 EIF3KQ9UBQ5 218 aaKnown RBP11.21□□□□□ -0.61
SHMT2-211ENST00000554310 REV1Q9UBZ9 1251 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 DUSP13Q9UII6 198 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 GPR160Q9UJ42 338 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 TPRKBQ9Y3C4 175 aa11.21□□□□□ -0.61
SHMT2-211ENST00000554310 LOC100509620A0A075B734 347 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 TLX2O43763 284 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-211ENST00000554310 CD5LO43866 347 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 RENP00797 406 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 COX5BP10606 129 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 DAOP14920 347 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 USF1P22415 310 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-211ENST00000554310 CCNOP22674 350 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 NOS3P29474 1203 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 GGT2P36268 569 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 WNT5AP41221 380 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 CDKN2AP42771 156 aaKnown RBP11.2□□□□□ -0.62
SHMT2-211ENST00000554310 ALDH3B1P43353 468 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 NR4A2P43354 598 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 LSM6P62312 80 aaKnown RBP11.2□□□□□ -0.62
SHMT2-211ENST00000554310 CSNK2BP67870 215 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 CARTPTQ16568 116 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 NKPD1Q17RQ9 610 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 TMEM249Q2WGJ8 235 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 LRP11Q86VZ4 500 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 ZNF101Q8IZC7 436 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 SPARTQ8N0X7 666 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 OR9Q2Q8NGE9 314 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 OR1J1Q8NGS3 322 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 ZNF420Q8TAQ5 688 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-211ENST00000554310 SNX33Q8WV41 574 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 ZFAND2BQ8WV99 257 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 SAMD8Q96LT4 415 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 RACGAP1Q9H0H5 632 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 TPK1Q9H3S4 243 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 DUSP21Q9H596 190 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 RERGLQ9H628 205 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 SCN3BQ9NY72 215 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 SLCO1C1Q9NYB5 712 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 MYEF2Q9P2K5 600 aaKnown RBP11.2□□□□□ -0.62
SHMT2-211ENST00000554310 ASH2LQ9UBL3 628 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 ATPIF1Q9UII2 106 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 FZR1Q9UM11 496 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 PCDHGB1Q9Y5G3 927 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 SNX5Q9Y5X3 404 aa11.2□□□□□ -0.62
SHMT2-211ENST00000554310 IGLV1-36A0A0B4J1U3 117 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 SGCEO43556 437 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 DOK2O60496 412 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 SCG5P05408 212 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 HTR1AP08908 422 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 GAAP10253 952 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 HIST1H1CP16403 213 aaKnown RBP11.19□□□□□ -0.62
SHMT2-211ENST00000554310 GIFP27352 417 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 HTR5AP47898 357 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 ERVS71-1P61550 626 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 GLO1Q04760 184 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 LSAMPQ13449 338 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 KCNMB1Q16558 191 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 MOGQ16653 247 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 LEG1Q6P5S2 330 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 ARL9Q6T311 187 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 RASSF6Q6ZTQ3 369 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 RFPL4BQ6ZWI9 263 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 ZCCHC24Q8N2G6 241 aaKnown RBP11.19□□□□□ -0.62
SHMT2-211ENST00000554310 AQP11Q8NBQ7 271 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms