RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 GLO1Q04760 184 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 SCRN3Q0VDG4 424 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 MEP1BQ16820 701 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 ZNF362Q5T0B9 420 aaPredicted RBP20.22■□□□□ 0.83
TDP1-205ENST00000553527 ABHD4Q8TB40 342 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 VCXQ9H320 206 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 MYOZ1Q9NP98 299 aaPredicted RBP20.22■□□□□ 0.83
TDP1-205ENST00000553527 YAE1D1Q9NRH1 226 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 TVP23BQ9NYZ1 205 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 ASH2LQ9UBL3 628 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 B9D1Q9UPM9 204 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 POLR1DQ9Y2S0 133 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 FN1P02751 2386 aaKnown RBP20.21■□□□□ 0.83
TDP1-205ENST00000553527 NDUFS8O00217 210 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 SGCEO43556 437 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 DOK2O60496 412 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 ZNF250P15622 560 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 NR4A2P43354 598 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 HTR5AP47898 357 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 LOXL1Q08397 574 aaPredicted RBP20.21■□□□□ 0.83
TDP1-205ENST00000553527 SNAPC1Q16533 368 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 OR6V1Q8N148 313 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 OR9Q1Q8NGQ5 310 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 OR2T4Q8NH00 348 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 SLC25A40Q8TBP6 338 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 OTULINQ96BN8 352 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 RDH12Q96NR8 316 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 MBOAT4Q96T53 435 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 RACGAP1Q9H0H5 632 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 SMPD3Q9NY59 655 aaPredicted RBP20.21■□□□□ 0.83
TDP1-205ENST00000553527 PLEK2Q9NYT0 353 aa20.21■□□□□ 0.83
TDP1-205ENST00000553527 NSD1Q96L73 2696 aaPredicted RBP20.2■□□□□ 0.82
TDP1-205ENST00000553527 NGFP01138 241 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 GCH1P30793 250 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 AQP6Q13520 282 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 TMEM249Q2WGJ8 235 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 ZNF718Q3SXZ3 478 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 C12orf73Q69YU5 71 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 UNQ6126/PRO20091Q6UXV3 157 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 PROKR2Q8NFJ6 384 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 C4orf45Q96LM5 186 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 DDOQ99489 341 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 BPESC1Q9GZL8 116 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 GPR160Q9UJ42 338 aa20.2■□□□□ 0.82
TDP1-205ENST00000553527 NDRG4Q9ULP0 352 aaKnown RBP20.2■□□□□ 0.82
TDP1-205ENST00000553527 NAV3Q8IVL0 2385 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 IGLV1-36A0A0B4J1U3 117 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 FAM183AA6NL82 134 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 VWC2LB2RUY7 222 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 PRR23D1E9PI22 279 aaPredicted RBP20.19■□□□□ 0.82
TDP1-205ENST00000553527 HLA-DQA2P01906 255 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 HPXP02790 462 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 PRR23D2P0DMB1 279 aaPredicted RBP20.19■□□□□ 0.82
TDP1-205ENST00000553527 SLC25A1P53007 311 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 LSM6P62312 80 aaKnown RBP20.19■□□□□ 0.82
TDP1-205ENST00000553527 RFPL4BQ6ZWI9 263 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 VASH1Q7L8A9 365 aaPredicted RBP20.19■□□□□ 0.82
TDP1-205ENST00000553527 ZBTB46Q86UZ6 589 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 SNX33Q8WV41 574 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 SLC7A6Q92536 515 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 WACQ9BTA9 647 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 OR2J1Q9GZK6 312 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 SLCO1C1Q9NYB5 712 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 GRIP1Q9Y3R0 1128 aa20.19■□□□□ 0.82
TDP1-205ENST00000553527 IGLV3-9A0A075B6K5 115 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 M0R129 80 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 RER1O15258 196 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 CD5LO43866 347 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 ABHD16AO95870 558 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 COL8A2P25067 703 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 MPV17P39210 176 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 MAGEB1P43366 347 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 PPP1CBP62140 327 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 PLBD1Q6P4A8 553 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 TMEM154Q6P9G4 183 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 CORO6Q6QEF8 472 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 ARL9Q6T311 187 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 ZNF786Q8N393 782 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 GTF3AQ92664 365 aaKnown RBP20.18■□□□□ 0.82
TDP1-205ENST00000553527 MARS2Q96GW9 593 aaKnown RBP20.18■□□□□ 0.82
TDP1-205ENST00000553527 NMNAT2Q9BZQ4 307 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 MED20Q9H944 212 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 ELOVL3Q9HB03 270 aa20.18■□□□□ 0.82
TDP1-205ENST00000553527 HINT3Q9NQE9 182 aaKnown RBP20.18■□□□□ 0.82
TDP1-205ENST00000553527 IGHV4-61A0A0C4DH41 118 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 PRKYO43930 277 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 GYPBP06028 91 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 SPI1P17947 270 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 PYCR1P32322 319 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 CDC42P60953 191 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 CCDC92Q53HC0 331 aaPredicted RBP20.17■□□□□ 0.82
TDP1-205ENST00000553527 ELFN2Q5R3F8 820 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 CXXC5Q7LFL8 322 aaKnown RBP20.17■□□□□ 0.82
TDP1-205ENST00000553527 ZNF540Q8NDQ6 660 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 FAM81AQ8TBF8 368 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 KLF14Q8TD94 323 aaPredicted RBP20.17■□□□□ 0.82
TDP1-205ENST00000553527 NRG4Q8WWG1 115 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 IPCEF1Q8WWN9 437 aaPredicted RBP20.17■□□□□ 0.82
TDP1-205ENST00000553527 HRASLS5Q96KN8 279 aa20.17■□□□□ 0.82
TDP1-205ENST00000553527 VCX3BQ9H321 246 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms