RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RAB14P61106 215 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 TSPAN5P62079 268 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 NHLH1Q02575 133 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 PHF19Q5T6S3 580 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 TMEM81Q6P7N7 255 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 PPP1R3BQ86XI6 285 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 LYPD6Q86Y78 171 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 SLC38A9Q8NBW4 561 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 EDEM2Q9BV94 578 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 MRPL13Q9BYD1 178 aaKnown RBP11.52□□□□□ -0.57
SHMT2-205ENST00000553474 WDR54Q9H977 334 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 MED11Q9P086 117 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 PIPOXQ9P0Z9 390 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 FBLN5Q9UBX5 448 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 IGHV5-10-1A0A0J9YXX1 117 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF354AO60765 605 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-205ENST00000553474 PMS2P2O95744 297 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 IGHG1P01857 330 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 ITGB2P05107 769 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF806P0C7X5 589 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 PTHLHP12272 177 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 NFYAP23511 347 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-205ENST00000553474 LAP3P28838 519 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 P2RX3P56373 397 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 PLA2G7Q13093 441 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 GRK1Q15835 563 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 FAM189A2Q15884 450 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 OR5M10Q6IEU7 315 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 ARSKQ6UWY0 536 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-205ENST00000553474 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 ELMOD2Q8IZ81 293 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 GABRG1Q8N1C3 465 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 SEH1LQ96EE3 360 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 DNAJA3Q96EY1 480 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 FOXN4Q96NZ1 517 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 SPSB2Q99619 263 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 CRB3Q9BUF7 120 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 PTGES2Q9H7Z7 377 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 METTL7AQ9H8H3 244 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 APMAPQ9HDC9 416 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 PARD6AQ9NPB6 346 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 FAM206AQ9NX38 181 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 VDAC3Q9Y277 283 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 HDGFL3Q9Y3E1 203 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 RIF1Q5UIP0 2472 aaKnown RBP11.51□□□□□ -0.57
SHMT2-205ENST00000553474 OR6C65A6NJZ3 312 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 LEUTXA8MZ59 168 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 KDM4BO94953 1096 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 MPZL1O95297 269 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 CYB5AP00167 134 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 CD74P04233 296 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 IL11P20809 199 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 BDKRB2P30411 391 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 GMFBP60983 142 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 FMODQ06828 376 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 MYBPHQ13203 477 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 MEF2DQ14814 521 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 FAAP20Q6NZ36 180 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 LYPD8Q6UX82 237 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 TMPRSS9Q7Z410 1059 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 OR51S1Q8NGJ8 323 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 OR5D14Q8NGL3 314 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 SLAMF6Q96DU3 332 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 CITED4Q96RK1 184 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 TMEM138Q9NPI0 162 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 B3GAT1Q9P2W7 334 aa11.51□□□□□ -0.57
SHMT2-205ENST00000553474 MRPS18BQ9Y676 258 aaKnown RBP11.51□□□□□ -0.57
SHMT2-205ENST00000553474 A0A1W2PQM1 296 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 TP53I11O14683 189 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 RAB3DO95716 219 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 BPNT1O95861 308 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 CD3DP04234 171 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 MPZP25189 248 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 PTGDSP41222 190 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 BIDP55957 195 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 EIF3IQ13347 325 aaKnown RBP11.5□□□□□ -0.57
SHMT2-205ENST00000553474 EXOSC2Q13868 293 aaKnown RBP11.5□□□□□ -0.57
SHMT2-205ENST00000553474 IL11RAQ14626 422 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 CLVS2Q5SYC1 327 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 GUSBP11Q6P575 273 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF813Q6ZN06 617 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 BIVMQ86UB2 503 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 KDM8Q8N371 416 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 SLC22A24Q8N4F4 322 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 JAGN1Q8N5M9 183 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 OR2AK2Q8NG84 335 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 OR6X1Q8NH79 312 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 SAP25Q8TEE9 199 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 THAP3Q8WTV1 239 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-205ENST00000553474 ZBTB8AQ96BR9 441 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 SPACA9Q96E40 222 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-205ENST00000553474 MED29Q9NX70 200 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 SLC2A8Q9NY64 477 aa11.5□□□□□ -0.57
SHMT2-205ENST00000553474 OPN4Q9UHM6 478 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms