RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ZNF511Q8NB15 262 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 WFDC11Q8NEX6 87 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 OR1J1Q8NGS3 322 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 ABHD4Q8TB40 342 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 PTP4A1Q93096 173 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 MAP6Q96JE9 813 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 COG8Q96MW5 612 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 PITX2Q99697 317 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 DOK1Q99704 481 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 SYT3Q9BQG1 590 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 RIBC2Q9H4K1 309 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 DYNLRB1Q9NP97 96 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 TUBG2Q9NRH3 451 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 TBCCD1Q9NVR7 557 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 TVP23BQ9NYZ1 205 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 TEP1Q99973 2627 aaKnown RBP10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 YLPM1P49750 1951 aaKnown RBP10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 A0A1W2PPW3 197 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 ZNF878C9JN71 531 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 ZNF593O00488 134 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 PRKYO43930 277 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 ERCC1P07992 297 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 RPS27P42677 84 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 EFNA4P52798 201 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 NUDT6P53370 316 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 RAD23AP54725 363 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 SELENOVP59797 346 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 KLHL12Q53G59 568 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 LCN1P1Q5VSP4 162 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 DCXRQ7Z4W1 244 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 ERI1Q8IV48 349 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 TIGD4Q8IY51 512 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 CBR4Q8N4T8 237 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 BBS1Q8NFJ9 593 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 OR10S1Q8NGN2 331 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 OR6N2Q8NGY6 317 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 SYNPRQ8TBG9 265 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 TMEM163Q8TC26 289 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 ST7LQ8TDW4 575 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 SLC7A6Q92536 515 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 MARS2Q96GW9 593 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 SORCS2Q96PQ0 1159 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 OR51V1Q9H2C8 321 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 SLCO1C1Q9NYB5 712 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 MYEF2Q9P2K5 600 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 GPR160Q9UJ42 338 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 FZR1Q9UM11 496 aa10.05□□□□□ -0.8
TRAFD1-209ENST00000552896 CCDC182A6NF36 153 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 M0R129 80 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 NDUFS7O75251 213 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 NGFP01138 241 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 IGHV3-13P01766 116 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 DBHP09172 617 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 CSF3P09919 207 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 ACSM4P0C7M7 580 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 GCH1P30793 250 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 OTX1P32242 354 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 RPS7P62081 194 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 EFNB1P98172 346 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 APOFQ13790 326 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 GGTLC2Q14390 218 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 ZNF718Q3SXZ3 478 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 SPATA46Q5T0L3 261 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 NXNL2Q5VZ03 156 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 TMEM154Q6P9G4 183 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 DNM1P46Q6ZS02 220 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 SHFQ7M4L6 423 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 LRP11Q86VZ4 500 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 GID4Q8IVV7 300 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 SLC25A40Q8TBP6 338 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 SNX33Q8WV41 574 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 APOBEC3DQ96AK3 386 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 EME1Q96AY2 570 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 SLAMF6Q96DU3 332 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 ZMYND19Q96E35 227 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 Q96MF0 132 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 VRK1Q99986 396 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 C1QTNF5Q9BXJ0 243 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 OR2J1Q9GZK6 312 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 RAB1BQ9H0U4 201 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 MYOZ1Q9NP98 299 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 CGGBP1Q9UFW8 167 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 GRIP1Q9Y3R0 1128 aa10.04□□□□□ -0.8
TRAFD1-209ENST00000552896 SLC22A31A6NKX4 558 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 E9PQ18 207 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 M0R135 149 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 SELENOFO60613 162 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 BAG2O95816 211 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 CLPTM1O96005 669 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 F12P00748 615 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 MT-ND5P03915 603 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 ADRA2AP08913 450 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 POLR2IP36954 125 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 MPV17P39210 176 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 ALDH3B1P43353 468 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 TPTEP56180 551 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 CDC42P60953 191 aa10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 GRB2P62993 217 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-209ENST00000552896 EIF2B1Q14232 305 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms