RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 C14orf119Q9NWQ9 140 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SELENONQ9NZV5 590 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 FBLN5Q9UBX5 448 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 IL19Q9UHD0 177 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 VPREB3Q9UKI3 123 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 IFT52Q9Y366 437 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 FAM96BQ9Y3D0 163 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 USH1CQ9Y6N9 552 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CSMD3Q7Z407 3707 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 A0A0B4J2E0 115 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 A0A1B0GX12 115 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 TMEM247A6NEH6 219 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 SMIM23A6NLE4 172 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 E9PBE3 544 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 RNASEK-C17orf49H0YIS7 233 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 RNF13O43567 381 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 SLC2A10O95528 541 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ABHD16AO95870 558 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 CH25HO95992 272 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 FBP1P09467 338 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 VSIG10L2P0DP72 767 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 KRT4P19013 534 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 CD247P20963 164 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 GSTM3P21266 225 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 EPHA3P29320 983 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 IL12AP29459 219 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 PMELP40967 661 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ERFP50548 548 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 EFNB2P52799 333 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 NCALDP61601 193 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 UFM1P61960 85 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ARF6P62330 175 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ERVK-25P63136 954 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 PRB3Q04118 309 aaPredicted RBP4.41□□□□□ -1.7
HOXB3-213ENST00000552000 COX10Q12887 443 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 OR1Q1Q15612 314 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 DPY19L1Q2PZI1 675 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 GTDC1Q4AE62 458 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 METTL11BQ5VVY1 283 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ULK3Q6PHR2 472 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF841Q6ZN19 808 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 NUDCD3Q8IVD9 361 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 OR5AS1Q8N127 324 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 LSMEM1Q8N8F7 131 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ATG16L2Q8NAA4 619 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 C19orf18Q8NEA5 215 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 NOXO1Q8NFA2 376 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 OR10AD1Q8NGE0 317 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 CFHR4Q92496 578 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 NSMAFQ92636 917 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 SLC35B4Q969S0 331 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 CMBLQ96DG6 245 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 C4orf45Q96LM5 186 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 MAGEB18Q96M61 343 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 CCDC140Q96MF4 163 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 TECTBQ96PL2 329 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 OR52E6Q96RD3 313 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF607Q96SK3 696 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 OR2H1Q9GZK4 316 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 WDR12Q9GZL7 423 aaKnown RBP4.41□□□□□ -1.7
HOXB3-213ENST00000552000 SIRPDQ9H106 197 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 MMADHCQ9H3L0 296 aaPredicted RBP4.41□□□□□ -1.7
HOXB3-213ENST00000552000 MEAF6Q9HAF1 191 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 TMEM27Q9HBJ8 222 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 GAR1Q9NY12 217 aaKnown RBP4.41□□□□□ -1.7
HOXB3-213ENST00000552000 TAS2R5Q9NYW4 299 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 ZNRD1Q9P1U0 126 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 SLC17A7Q9P2U7 560 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 PYCARDQ9ULZ3 195 aa4.41□□□□□ -1.7
HOXB3-213ENST00000552000 IGKV1D-43A0A0B4J1Z2 117 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 A0A1W2PRD5 423 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 A0A1W2PRF3 423 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 A0A1W2PRM7 423 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 LRRC30A6NM36 301 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 MCIDASD6RGH6 385 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 F5H5P2 479 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 J3KRW8 73 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 RFXANKO14593 260 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 TPST1O60507 370 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 MT-ATP6P00846 226 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 OPN1SWP03999 348 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 LIPFP07098 398 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 CD28P10747 220 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 NAT1P18440 290 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 KITLGP21583 273 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 MSX2P35548 267 aaPredicted RBP4.4□□□□□ -1.71
HOXB3-213ENST00000552000 SERPINB5P36952 375 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 SRP9P49458 86 aaKnown RBP4.4□□□□□ -1.71
HOXB3-213ENST00000552000 SLURP1P55000 103 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 CDH12P55289 794 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 RGS8P57771 180 aaPredicted RBP4.4□□□□□ -1.71
HOXB3-213ENST00000552000 MRPS34P82930 218 aaKnown RBP4.4□□□□□ -1.71
HOXB3-213ENST00000552000 HOXA4Q00056 320 aaPredicted RBP4.4□□□□□ -1.71
HOXB3-213ENST00000552000 GUCY1A3Q02108 690 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 FMODQ06828 376 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 CKAP4Q07065 602 aaKnown RBP4.4□□□□□ -1.71
HOXB3-213ENST00000552000 HIST3H3Q16695 136 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 SLC35F1Q5T1Q4 408 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 C10orf128Q5T292 105 aa4.4□□□□□ -1.71
HOXB3-213ENST00000552000 CD276Q5ZPR3 534 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms