RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 GPAT4Q86UL3 456 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 MDP1Q86V88 176 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 CLEC4FQ8N1N0 589 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 BPIFB2Q8N4F0 458 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 ARFGAP2Q8N6H7 521 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 KRTCAP2Q8N6L1 136 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 DEFB108BQ8NET1 73 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 OR4M2Q8NGB6 313 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 OR5AK3PQ8NH89 298 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 BCAS4Q8TDM0 211 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 C22orf15Q8WYQ4 148 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 POP5Q969H6 163 aaKnown RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 ROPN1LQ96C74 230 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 CHMP6Q96FZ7 201 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 ALKBH3Q96Q83 286 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 GPA33Q99795 319 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 SLC38A1Q9H2H9 487 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 OR51I1Q9H343 314 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 CRLF2Q9HC73 371 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 SNTG1Q9NSN8 517 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 PLEK2Q9NYT0 353 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 ZNF224Q9NZL3 707 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 B3GAT1Q9P2W7 334 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 SLC25A10Q9UBX3 287 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 DCDC2Q9UHG0 476 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 LEF1Q9UJU2 399 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 NUP50Q9UKX7 468 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 RABL2BQ9UNT1 228 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 RASD1Q9Y272 281 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 RAP2CQ9Y3L5 183 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 WDR45Q9Y484 360 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 HERC1Q15751 4861 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 STAB2Q8WWQ8 2551 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 A0A087WUV0 522 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-206ENST00000550611 IGHV1-69-2A0A0G2JMI3 117 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 A0A1B0GUS0 222 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 A0A1W2PPM1 405 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 RBMY1BA6NDE4 496 aaKnown RBP2.96□□□□□ -1.94
LIMA1-206ENST00000550611 RBMY1EA6NEQ0 496 aaKnown RBP2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CFAP73A6NFT4 308 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 A8MVM7 634 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF99A8MXY4 864 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM114B3SHH9 223 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 TRAPPC2LH3BP13 241 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 HMGN4O00479 90 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PLIN3O60664 434 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PEX11AO75192 247 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CRCPO75575 148 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 KRT33AO76009 404 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CLPTM1O96005 669 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 HLA-HP01893 362 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 C1QCP02747 245 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ABHD2P08910 425 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CCDC159P0C7I6 412 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 RBMY1DP0C7P1 496 aaKnown RBP2.96□□□□□ -1.94
LIMA1-206ENST00000550611 MYL2P10916 166 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CPA3P15088 417 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF250P15622 560 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF12P17014 697 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PRPS1L1P21108 318 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 HPCAL1P37235 193 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CLDN8P56748 225 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CLDN17P56750 224 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CBX1P83916 185 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PAX2Q02962 417 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PAX8Q06710 450 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 NPRL3Q12980 569 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 BNIP2Q12982 314 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 BAMBIQ13145 260 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PTGR1Q14914 329 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 MED22Q15528 200 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 TAF11Q15544 211 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CEACAM16Q2WEN9 425 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PCGF3Q3KNV8 242 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF311Q5JNZ3 666 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ENTPD8Q5MY95 495 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 C6orf136Q5SQH8 315 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 AVPI1Q5T686 147 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 C1orf140Q5VVS0 124 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 IL23RQ5VWK5 629 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PRAMEF8Q5VWM4 474 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PRAMEF7Q5VXH5 474 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ASPHD2Q6ICH7 369 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 LEG1Q6P5S2 330 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 LRRC74BQ6ZQY2 392 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 PRSS45Q7RTY3 260 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 HMGN2P46Q86SG4 172 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF584Q8IVC4 421 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 WDFY1Q8IWB7 410 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 DDIASQ8IXT1 998 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 C20orf196Q8IYI0 205 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 CLECL1Q8IZS7 167 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM123Q8N131 208 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 KDM8Q8N371 416 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 ANKFN1Q8N957 763 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 OR8J2Q8NGG1 315 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 MFSD8Q8NHS3 518 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 FGFBP3Q8TAT2 258 aa2.96□□□□□ -1.94
LIMA1-206ENST00000550611 RAB8BQ92930 207 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms