RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 LIX1Q8N485 282 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 KLHDC1Q8N7A1 406 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 SDR9C7Q8NEX9 313 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 OR4A4PQ8NGN8 299 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 OR52N5Q8NH56 324 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 CD99L2Q8TCZ2 262 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 GPR151Q8TDV0 419 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 PHLDA1Q8WV24 401 aaPredicted RBP4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 PIH1D2Q8WWB5 315 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 TESCQ96BS2 214 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 CMTM7Q96FZ5 175 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 PELOQ9BRX2 385 aaKnown RBP4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 URM1Q9BTM9 101 aaKnown RBP4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 OR2B2Q9GZK3 357 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 CCDC90BQ9GZT6 254 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 GABARAPL1Q9H0R8 117 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 OPN3Q9H1Y3 402 aaPredicted RBP4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 ATP13A3Q9H7F0 1226 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 VAPAQ9P0L0 249 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 ENOPH1Q9UHY7 261 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 ZNF229Q9UJW7 825 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 STOML2Q9UJZ1 356 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 LSM7Q9UK45 103 aaKnown RBP4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 NUP50Q9UKX7 468 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 POFUT2Q9Y2G5 429 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 V9GYQ6 96 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 MYLKQ15746 1914 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 TANC1Q9C0D5 1861 aa4.31□□□□□ -1.72
ATP2B1-206ENST00000549727 A0A0A6YYH2 397 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 TRBV5-4A0A0C4DH59 114 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 A0A1W2PPV9 198 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 A0A1W2PRD5 423 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 FUOMA2VDF0 154 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 A6NJ64 397 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 LOC730098B7Z3J9 87 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 RNASEK-C17orf49H0YIS7 233 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 SLC1A7O00341 560 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 RFXANKO14593 260 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 TOR1AO14656 332 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 SCAMP2O15127 329 aaKnown RBP4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 COCHO43405 550 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 CHST1O43916 411 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 DPM1O60762 260 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 RAMP3O60896 148 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 SULT1C4O75897 302 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAGE7O76087 117 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 AP2A2O94973 939 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 ANGPTL1O95841 491 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 IGSF6O95976 241 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 SERPINA1P01009 418 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 CST4P01036 141 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 IGHG3P01860 377 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAPDHP04406 335 aaKnown RBP4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 ALDOBP05062 364 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 FABP3P05413 133 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAGE12FP0CL80 117 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAGE12GP0CL81 117 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAGE12IP0CL82 117 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 PRSS56P0CW18 603 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 BCKDHAP12694 445 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 IGFBP5P24593 272 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 RPL3P39023 403 aaKnown RBP4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 DCTP40126 519 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 MAGEA2P43356 314 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 MAGEA5P43359 124 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 YAP1P46937 504 aaKnown RBP4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 RGRP47804 291 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAS1P54826 345 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 MLLT10P55197 1068 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 AP1S2P56377 157 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 VBP1P61758 197 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 RPS24P62847 133 aaKnown RBP4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 CD47Q08722 323 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 KLRB1Q12918 225 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAGE1Q13065 139 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GAGE4Q13068 117 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 MS4A18Q3C1V0 323 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 TMEM35AQ53FP2 167 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 SPANXN4Q5MJ08 99 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 GPRC6AQ5T6X5 926 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 TIGD3Q6B0B8 471 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 XAF1Q6GPH4 301 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 C22orf42Q6IC83 251 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 OR2T5Q6IEZ7 315 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 C1orf94Q6P1W5 598 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 Q6ZRG5 221 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 ITIH5Q86UX2 942 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 CALHM3Q86XJ0 350 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 RNF130Q86XS8 419 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 CACUL1Q86Y37 369 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 CLIP4Q8N3C7 705 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 ZNF557Q8N988 423 aaPredicted RBP4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 DCAF4L2Q8NA75 395 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 INO80EQ8NBZ0 244 aaPredicted RBP4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 BPIFB6Q8NFQ5 453 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 OR4D6Q8NGJ1 314 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 OR2T29Q8NH02 315 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 C8orf46Q8TAG6 207 aa4.3□□□□□ -1.72
ATP2B1-206ENST00000549727 FANK1Q8TC84 345 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms