RNA–Protein interactions for RNA: ENST00000549064.1

LIMA1-204, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-204ENST00000549064 IGHV2-70DA0A0C4DH43 119 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 ZNF816-ZNF321PA0A0X1KG74 233 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 hCG_1809904A0A1W2PP81 198 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 A0A1W2PPE2 198 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 A0A1W2PR64 198 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 TMEM247A6NEH6 219 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 CEACAM18A8MTB9 384 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 NPIPB11E5RHQ5 1161 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 FTCDNL1E5RQL4 147 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 CFLARO15519 480 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 CRCPO75575 148 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 AK1P00568 194 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 SERPINA5P05154 406 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 OR12D1P0DN82 309 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 MPV17P39210 176 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 CAMPP49913 170 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 MMP15P51511 669 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 FGF12P61328 243 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 GNB2P62879 340 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 HBA1P69905 142 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 SLC3A1Q07837 685 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 TMEM155Q4W5P6 130 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 CXorf66Q5JRM2 361 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-204ENST00000549064 SPATA46Q5T0L3 261 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 GPR157Q5UAW9 335 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 C1orf140Q5VVS0 124 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 AP1ARQ63HQ0 302 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 C6orf89Q6UWU4 347 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 BTNL3Q6UXE8 466 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 LRRN1Q6UXK5 716 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 GLDNQ6ZMI3 551 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-204ENST00000549064 C6orf120Q7Z4R8 191 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 SKA3Q8IX90 412 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 DDIASQ8IXT1 998 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 CADM2Q8N3J6 435 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 SLC30A7Q8NEW0 376 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 ZNF519Q8TB69 540 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 FBXO25Q8TCJ0 367 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 SSMEM1Q8WWF3 244 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 MTERF3Q96E29 417 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 FAM71F1Q96KD3 344 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-204ENST00000549064 ERP44Q9BS26 406 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 EMC6Q9BV81 110 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 C16orf95Q9H693 158 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 CDH20Q9HBT6 801 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 RANGRFQ9HD47 186 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-204ENST00000549064 IL20RAQ9UHF4 553 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 FOXJ3Q9UPW0 622 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 POFUT2Q9Y2G5 429 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 FAM96BQ9Y3D0 163 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 FIS1Q9Y3D6 152 aa5.37□□□□□ -1.55
LIMA1-204ENST00000549064 WI2-2373I1.2A0A1W2PRP0 233 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 DUXAA6NLW8 204 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 DBX1A6NMT0 343 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 A8MVM7 634 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 TNFRSF13BO14836 293 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 RAD51CO43502 376 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 XPNPEP2O43895 674 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 NPIPB7O75200 414 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 TPPPO94811 219 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 UBL3O95164 117 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 IGHV3-13P01766 116 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 C1QCP02747 245 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 SFTPBP07988 381 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 GSTA1P08263 222 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 INHBAP08476 426 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 WNT2P09544 360 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 TFPTP0C1Z6 253 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 GKN3PP0CG01 181 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 HLA-DOBP13765 273 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 PTMSP20962 102 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 ATP5F1P24539 256 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 HPCAL1P37235 193 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 RPS5P46782 204 aaKnown RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 RAD23AP54725 363 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 UCP2P55851 309 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 BTG1P62324 171 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 BLOC1S1P78537 153 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 HOXA4Q00056 320 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 C2orf54Q08AI8 447 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 BST1Q10588 318 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 CAMK2DQ13557 499 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 C1DQ13901 141 aaKnown RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 PTGR1Q14914 329 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 HERPUD1Q15011 391 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 DHRS7BQ6IAN0 325 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 ZNF774Q6NX45 483 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 TNFAIP8L2Q6P589 184 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 Q6ZTK2 550 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 ZNF627Q7L945 461 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 LRRC28Q86X40 367 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 UEVLDQ8IX04 471 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 C20orf196Q8IYI0 205 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 CLECL1Q8IZS7 167 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 MUC20Q8N307 709 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-204ENST00000549064 KRTCAP2Q8N6L1 136 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 OR1J1Q8NGS3 322 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 MOAP1Q96BY2 351 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 ROPN1LQ96C74 230 aa5.36□□□□□ -1.55
LIMA1-204ENST00000549064 METTL2AQ96IZ6 378 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms