RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 KCNS3Q9BQ31 491 aa18.23■□□□□ 0.51
CACNB3-210ENST00000548874 RHNO1Q9BSD3 238 aa18.23■□□□□ 0.51
CACNB3-210ENST00000548874 FGF20Q9NP95 211 aaPredicted RBP18.23■□□□□ 0.51
CACNB3-210ENST00000548874 CENPMQ9NSP4 180 aa18.23■□□□□ 0.51
CACNB3-210ENST00000548874 MYRFQ9Y2G1 1151 aa18.23■□□□□ 0.51
CACNB3-210ENST00000548874 PCDHGB5Q9Y5G0 923 aa18.23■□□□□ 0.51
CACNB3-210ENST00000548874 BAHCC1Q9P281 2608 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 XPNPEP2O43895 674 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 FADS2O95864 444 aaKnown RBP18.22■□□□□ 0.51
CACNB3-210ENST00000548874 PIPP12273 146 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-210ENST00000548874 PCSK6P29122 969 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 WNT5AP41221 380 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 CSNK2BP67870 215 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 NKX6-1P78426 367 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-210ENST00000548874 ZNF85Q03923 595 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 KCTD18Q6PI47 426 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-210ENST00000548874 DEGS2Q6QHC5 323 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 SLC22A25Q6T423 547 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 ZNF322Q6U7Q0 402 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-210ENST00000548874 SPATC1Q76KD6 591 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 SSX6Q7RTT6 188 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 LILRB1Q8NHL6 650 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-210ENST00000548874 IPCEF1Q8WWN9 437 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-210ENST00000548874 GGHQ92820 318 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 OR8B4Q96RC9 309 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 TBX5Q99593 518 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 KCNJ15Q99712 375 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 COPS4Q9BT78 406 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 JAM3Q9BX67 310 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 PSORS1C1Q9UIG5 152 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 RTTNQ86VV8 2226 aa18.22■□□□□ 0.51
CACNB3-210ENST00000548874 ABCA4P78363 2273 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 IRGMA1A4Y4 181 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 SLC1A7O00341 560 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 ACSM4P0C7M7 580 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 CCNOP22674 350 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 NR4A1P22736 598 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 SSTR2P30874 369 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 GRB2P62993 217 aaKnown RBP18.21■□□□□ 0.51
CACNB3-210ENST00000548874 TLE4Q04727 773 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 EGR3Q06889 387 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 ZNF684Q5T5D7 378 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 KRT80Q6KB66 452 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 LRRN1Q6UXK5 716 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 ACBD7Q8N6N7 88 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 NUP37Q8NFH4 326 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 BPIFB6Q8NFQ5 453 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 C4orf45Q96LM5 186 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 FKBP14Q9NWM8 211 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 SLCO1C1Q9NYB5 712 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 UBAP1Q9NZ09 502 aa18.21■□□□□ 0.51
CACNB3-210ENST00000548874 CNOT2Q9NZN8 540 aaKnown RBP18.21■□□□□ 0.51
CACNB3-210ENST00000548874 HEATR1Q9H583 2144 aaKnown RBP18.2■□□□□ 0.5
CACNB3-210ENST00000548874 EFCAB10A6NFE3 127 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 F5H5K5 113 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 FAM20BO75063 409 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 H2BFMP0C1H6 154 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 CCDC159P0C7I6 412 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 GALK2Q01415 458 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 TAF13Q15543 124 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 COLCA1Q6ZS62 124 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 KRT77Q7Z794 578 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF679Q8IYX0 411 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF101Q8IZC7 436 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 NEUROG1Q92886 237 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 SPTSSAQ969W0 71 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF649Q9BS31 505 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 TTTY10Q9BZA0 68 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 CLEC4MQ9H2X3 399 aaPredicted RBP18.2■□□□□ 0.5
CACNB3-210ENST00000548874 INPP5EQ9NRR6 644 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 LRRC42Q9Y546 428 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 LRP12Q9Y561 859 aa18.2■□□□□ 0.5
CACNB3-210ENST00000548874 M0R135 149 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 SMPD2O60906 423 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF254O75437 659 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 ADRA2AP08913 450 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 DCKP27707 260 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 UCP2P55851 309 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 TPTEP56180 551 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 SNTB2Q13425 540 aaKnown RBP18.19■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF672Q499Z4 452 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF799Q96GE5 643 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 MROQ9BYG7 248 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 NIPAL2Q9H841 368 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 ELOVL3Q9HB03 270 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 TBCCD1Q9NVR7 557 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 EIF3KQ9UBQ5 218 aaKnown RBP18.19■□□□□ 0.5
CACNB3-210ENST00000548874 MRM2Q9UI43 246 aaKnown RBP18.19■□□□□ 0.5
CACNB3-210ENST00000548874 DIMT1Q9UNQ2 313 aaKnown RBP18.19■□□□□ 0.5
CACNB3-210ENST00000548874 GRIP1Q9Y3R0 1128 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 SPEF1Q9Y4P9 236 aa18.19■□□□□ 0.5
CACNB3-210ENST00000548874 DAPL1A0PJW8 107 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 E7EQL1 145 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 J3QW42 95 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 PSMD9O00233 223 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 ABHD16AO95870 558 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 FAM157BP0CG42 384 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 DCTDP32321 178 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 RGS6P49758 472 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 PRKXP51817 358 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms