RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 DNAJB9Q9UBS3 223 aa13.46□□□□□ -0.25
DDX54-205ENST00000548786 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
DDX54-205ENST00000548786 ABCA2Q9BZC7 2435 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 F5H5K5 113 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 IFNGP01579 166 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 SPARCP09486 303 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 SPI1P17947 270 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 IL2RGP31785 369 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 GGT2P36268 569 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 PRSS12P56730 875 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 HIST1H3AP68431 136 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 COX10Q12887 443 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 PSG7Q13046 419 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 RIN1Q13671 783 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 C6orf52Q5T4I8 152 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 HIST2H3PS2Q5TEC6 136 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 HIST2H3AQ71DI3 136 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 OR5AS1Q8N127 324 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 ATG16L2Q8NAA4 619 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 ZNF511Q8NB15 262 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 RDH5Q92781 318 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 RBM4Q9BWF3 364 aaKnown RBP13.45□□□□□ -0.26
DDX54-205ENST00000548786 HCAR1Q9BXC0 346 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 HDHD2Q9H0R4 259 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 WDR76Q9H967 626 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 ZNF556Q9HAH1 456 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 ZNF275Q9NSD4 429 aaPredicted RBP13.45□□□□□ -0.26
DDX54-205ENST00000548786 DECR2Q9NUI1 292 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 CYB5R1Q9UHQ9 305 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 BAIAP2Q9UQB8 552 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 CACNG2Q9Y698 323 aa13.45□□□□□ -0.26
DDX54-205ENST00000548786 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 ARRDC5A6NEK1 342 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 PPIHO43447 177 aaKnown RBP13.44□□□□□ -0.26
DDX54-205ENST00000548786 ICMTO60725 284 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 ATP5HO75947 161 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 IGHV1-46P01743 117 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 ZNF23P17027 643 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 ZNF3P17036 446 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 GIFP27352 417 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 RBMXP38159 391 aaKnown RBP13.44□□□□□ -0.26
DDX54-205ENST00000548786 MMP15P51511 669 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 GK3PQ14409 553 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 GINS1Q14691 196 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 MOGQ16653 247 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 AVPI1Q5T686 147 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 CYB5R2Q6BCY4 276 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 CD300LDQ6UXZ3 194 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 USP51Q70EK9 711 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 SPATC1Q76KD6 591 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 ZNF771Q7L3S4 317 aaPredicted RBP13.44□□□□□ -0.26
DDX54-205ENST00000548786 PAPD5Q8NDF8 572 aaKnown RBP13.44□□□□□ -0.26
DDX54-205ENST00000548786 ZNF540Q8NDQ6 660 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 CMBLQ96DG6 245 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 MAP6Q96JE9 813 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 COQ7Q99807 217 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 SOX7Q9BT81 388 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 CHODLQ9H9P2 273 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 SAP30LQ9HAJ7 183 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 NTN4Q9HB63 628 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 TBCCD1Q9NVR7 557 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 COMMD3-BMI1R4GMX3 469 aa13.44□□□□□ -0.26
DDX54-205ENST00000548786 A8MV72 311 aaPredicted RBP13.43□□□□□ -0.26
DDX54-205ENST00000548786 WNT9BO14905 357 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 LILRA1O75019 489 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 HOXB6P17509 224 aaKnown RBP13.43□□□□□ -0.26
DDX54-205ENST00000548786 ACHEP22303 614 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 GRK5P34947 590 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 GPR6P46095 362 aaPredicted RBP13.43□□□□□ -0.26
DDX54-205ENST00000548786 PCGF3Q3KNV8 242 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 SPRNQ5BIV9 151 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 TMEM236Q5W0B7 351 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 ACSM5Q6NUN0 579 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 NAA40Q86UY6 237 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 ATF6BQ99941 703 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 NMNAT2Q9BZQ4 307 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 PNRC2Q9NPJ4 139 aaKnown RBP13.43□□□□□ -0.26
DDX54-205ENST00000548786 CMC2Q9NRP2 79 aa13.43□□□□□ -0.26
DDX54-205ENST00000548786 PURGQ9UJV8 347 aaKnown RBP13.43□□□□□ -0.26
DDX54-205ENST00000548786 YLPM1P49750 1951 aaKnown RBP13.43□□□□□ -0.26
DDX54-205ENST00000548786 IGHV1-69-2A0A0G2JMI3 117 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 LOC100289279A0A1B0GTE1 492 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 H3BSA7 217 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 TLX2O43763 284 aaPredicted RBP13.42□□□□□ -0.26
DDX54-205ENST00000548786 DEAF1O75398 565 aaPredicted RBP13.42□□□□□ -0.26
DDX54-205ENST00000548786 RP2O75695 350 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 CIB2O75838 187 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 OSMP13725 252 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 FMO3P31513 532 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 CHN2P52757 468 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 SLC25A1P53007 311 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 MVKQ03426 396 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 RSPO1Q2MKA7 263 aaPredicted RBP13.42□□□□□ -0.26
DDX54-205ENST00000548786 OR2T2Q6IF00 324 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 SLC27A4Q6P1M0 643 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 SHQ1Q6PI26 577 aaKnown RBP13.42□□□□□ -0.26
DDX54-205ENST00000548786 DCXRQ7Z4W1 244 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 C1orf174Q8IYL3 243 aa13.42□□□□□ -0.26
DDX54-205ENST00000548786 BHLHE23Q8NDY6 225 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms