RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 CTAG2O75638 210 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 KRT33AO76009 404 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 CELA3AP09093 270 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 DBHP09172 617 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 CSRP1P21291 193 aaKnown RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 HSD11B1P28845 292 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 CCR9P51686 369 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 RRAS2P62070 204 aaPredicted RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 SRYQ05066 204 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 ACER2Q5QJU3 275 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 GTPBP8Q8N3Z3 284 aaPredicted RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 ACBD4Q8NC06 268 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 OR11H7Q8NGC8 314 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 OR52N4Q8NGI2 321 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 M1APQ8TC57 530 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 RNF133Q8WVZ7 376 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 FCAMRQ8WWV6 532 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 THOC3Q96J01 351 aaKnown RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 MNTQ99583 582 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 ZNF416Q9BWM5 594 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 ANGPTL4Q9BY76 406 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 B3GNT4Q9C0J1 378 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 PBOV1Q9GZY1 135 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 FAM206AQ9NX38 181 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 NPAP1Q9NZP6 1156 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 FARSAQ9Y285 508 aaKnown RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 A0A1W2PNV4 684 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 OR5H15A6NDH6 313 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 AQP7P3A6NL99 342 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 CSN2P05814 226 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 ANXA7P20073 488 aaKnown RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 UBE2MP61081 183 aaKnown RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 SPEM2Q0P670 501 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 ST3GAL2Q16842 350 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 FAM57BQ71RH2 274 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 ABHD12BQ7Z5M8 362 aaPredicted RBP9.82□□□□□ -0.84
CUX1-212ENST00000547394 PHYHIPQ92561 330 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 CREB3L1Q96BA8 519 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 OXGR1Q96P68 337 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 SEC22CQ9BRL7 303 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 TMEM246Q9BRR3 403 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 C1orf198Q9H425 327 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 FBXO4Q9UKT5 387 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 DMXL2Q8TDJ6 3036 aa9.82□□□□□ -0.84
CUX1-212ENST00000547394 ARPC1BO15143 372 aaKnown RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 SYT7O43581 403 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 TOXO94900 526 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CD2P06729 351 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 DLSTP36957 453 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 BLVRAP53004 296 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 SUCLG1P53597 346 aaKnown RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 ZNF121P58317 390 aaPredicted RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 TGIF1Q15583 401 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 PCGF3Q3KNV8 242 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 THOC7Q6I9Y2 204 aaKnown RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 KLHL24Q6TFL4 600 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 NOXA1Q86UR1 476 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 NAXDQ8IW45 347 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 ZNF454Q8N9F8 522 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 OR5D18Q8NGL1 313 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 OR1J2Q8NGS2 313 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 OR2AJ1Q8NGZ0 328 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 AKAP1Q92667 903 aaKnown RBP eCLIP9.81□□□□□ -0.841e-6■■■■□ 21.5
CUX1-212ENST00000547394 WDR89Q96FK6 387 aaPredicted RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 LIN37Q96GY3 246 aaPredicted RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 ZNF845Q96IR2 970 aaPredicted RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 MOV10Q9HCE1 1003 aaKnown RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 STMN3Q9NZ72 180 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CKLFQ9UBR5 152 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 ATMQ13315 3056 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CENPBD1B2RD01 187 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 NPIPA2E9PIF3 369 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 NPIPA3F8WFD2 350 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 TSC22D2O75157 780 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 P04436 131 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 H2AFB2P0C5Z0 115 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 AVPR2P30518 371 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 SLC6A9P48067 706 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 LINC00303Q3SY05 128 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 THEM4Q5T1C6 240 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CDCP2Q5VXM1 449 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 SLC25A25Q6KCM7 469 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 OR52B4Q8NGK2 314 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 GRPEL2Q8TAA5 225 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 ALKBH3Q96Q83 286 aaPredicted RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 SNX18Q96RF0 628 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CHIAQ9BZP6 476 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 C20orf85Q9H1P6 137 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 MED28Q9H204 178 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CUL9Q8IWT3 2517 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 LOC100509620A0A075B734 347 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CXCL13O43927 109 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 GLSO94925 669 aaPredicted RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 RAF1P04049 648 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 CALCBP10092 127 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 HLA-DMAP28067 261 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 HTR2CP28335 458 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 EIF1P41567 113 aaKnown RBP9.81□□□□□ -0.84
CUX1-212ENST00000547394 RAD52P43351 418 aa9.81□□□□□ -0.84
CUX1-212ENST00000547394 DSCR4P56555 118 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms