RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 EFCAB10A6NFE3 127 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 CD3EP07766 207 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 PATE4P0C8F1 98 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 PSKH1P11801 424 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ZNF32P17041 273 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ARR3P36575 388 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 CXCR4P61073 352 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 CSNK2BP67870 215 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ACTC1P68032 377 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ACTA1P68133 377 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 PIGFQ07326 219 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 RAB40BQ12829 278 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 PPA1Q15181 289 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 TAB1Q15750 504 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 CLEC12BQ2HXU8 276 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 GSG1Q2KHT4 349 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 KLHL22Q53GT1 634 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 TEX30Q5JUR7 227 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 RBM48Q5RL73 367 aaKnown RBP10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ALKBH2Q6NS38 261 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 SLC18B1Q6NT16 456 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 CORO6Q6QEF8 472 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 DCXRQ7Z4W1 244 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 SYT9Q86SS6 491 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 MDP1Q86V88 176 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 WDR31Q8NA23 367 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ZNF540Q8NDQ6 660 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 OR10H4Q8NGA5 316 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 FGFBP3Q8TAT2 258 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 SMAP2Q8WU79 429 aaPredicted RBP10.48□□□□□ -0.73
HDAC7-226ENST00000547259 AKAP1Q92667 903 aaKnown RBP eCLIP10.48□□□□□ -0.73
HDAC7-226ENST00000547259 FBXW5Q969U6 566 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 TBX5Q99593 518 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 RHNO1Q9BSD3 238 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 WACQ9BTA9 647 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 YIPF3Q9GZM5 350 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 BARX1Q9HBU1 254 aaPredicted RBP10.48□□□□□ -0.73
HDAC7-226ENST00000547259 PLCXD1Q9NUJ7 323 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ZNF224Q9NZL3 707 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 CYB5R1Q9UHQ9 305 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 LAMP5Q9UJQ1 280 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 BLOC1S6Q9UL45 172 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 LAMP3Q9UQV4 416 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 EXOGQ9Y2C4 368 aaKnown RBP10.48□□□□□ -0.73
HDAC7-226ENST00000547259 TPRKBQ9Y3C4 175 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 RNF115Q9Y4L5 304 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 PCDHGB1Q9Y5G3 927 aa10.48□□□□□ -0.73
HDAC7-226ENST00000547259 ZNF670-ZNF695F2Z2N8 137 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 PHYHO14832 338 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 SGCEO43556 437 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 DOK2O60496 412 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 FADS2O95864 444 aaKnown RBP10.47□□□□□ -0.73
HDAC7-226ENST00000547259 LYNP07948 512 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 MMP7P09237 267 aaPredicted RBP10.47□□□□□ -0.73
HDAC7-226ENST00000547259 CCDC159P0C7I6 412 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 HCCSP53701 268 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 RAB1AP62820 205 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 TNK1Q13470 666 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 PCK2Q16822 640 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 TMEM154Q6P9G4 183 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 CFAP77Q6ZQR2 320 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 C22orf34Q6ZV56 151 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 AHSA2Q719I0 299 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 STX19Q8N4C7 294 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 GJC3Q8NFK1 279 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 OR52I1Q8NGK6 324 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 AKR7LQ8NHP1 331 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 OTOSQ8NHW6 89 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 THEM6Q8WUY1 208 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 GGHQ92820 318 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 MNTQ99583 582 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 TTTY10Q9BZA0 68 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 OR2H1Q9GZK4 316 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 C1orf198Q9H425 327 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 NOX3Q9HBY0 568 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 MOV10Q9HCE1 1003 aaKnown RBP10.47□□□□□ -0.73
HDAC7-226ENST00000547259 FAIMQ9NVQ4 179 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 MRPS18AQ9NVS2 196 aaKnown RBP10.47□□□□□ -0.73
HDAC7-226ENST00000547259 PLEK2Q9NYT0 353 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 CNOT2Q9NZN8 540 aaKnown RBP10.47□□□□□ -0.73
HDAC7-226ENST00000547259 PSORS1C1Q9UIG5 152 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
HDAC7-226ENST00000547259 KLHDC2Q9Y2U9 406 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 TIMM10BQ9Y5J6 103 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 SLC25A15Q9Y619 301 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 TMEM14AQ9Y6G1 99 aa10.47□□□□□ -0.73
HDAC7-226ENST00000547259 HEATR1Q9H583 2144 aaKnown RBP10.46□□□□□ -0.73
HDAC7-226ENST00000547259 IQCMA0A1B0GVH7 501 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 PTGES3LE9PB15 166 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 OVOL3O00110 214 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 RER1O15258 196 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 OR2T7P0C7T2 308 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 PIPP12273 146 aaPredicted RBP10.46□□□□□ -0.73
HDAC7-226ENST00000547259 SLC15A1P46059 708 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 IDH3GP51553 393 aaPredicted RBP10.46□□□□□ -0.73
HDAC7-226ENST00000547259 PSG4Q00888 419 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 PLP2Q04941 152 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 RAB35Q15286 201 aa10.46□□□□□ -0.73
HDAC7-226ENST00000547259 PABPC1L2AQ5JQF8 200 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms