RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SLC25A37Q9NYZ2 338 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 CTSZQ9UBR2 303 aa12.61□□□□□ -0.39
CLSTN3-216ENST00000545663 A0A1W2PRX2 142 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 MEGF11A6BM72 1044 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 ENTPD5O75356 428 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 ATP5HO75947 161 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 LIPFP07098 398 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 CDAP32320 146 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 PSMB10P40306 273 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 NUDT2P50583 147 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 RASSF2P50749 326 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 DLX1P56177 255 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 EGFEM1PQ0D2K5 195 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 LY6EQ16553 131 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 RPS26P11Q5JNZ5 115 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 GCNT6Q5T4J0 391 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 NANOGP8Q6NSW7 305 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 ERICH5Q6P6B1 374 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 SLC35D2Q76EJ3 337 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 MOGAT3Q86VF5 341 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 SCAIQ8N9R8 606 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 ATG16L2Q8NAA4 619 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 OR10AD1Q8NGE0 317 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 ZNF566Q969W8 418 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 MAP6Q96JE9 813 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 CPPED1Q9BRF8 314 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 ASPNQ9BXN1 380 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 TMEM38AQ9H6F2 299 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 MAN2C1Q9NTJ4 1040 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 MRPL39Q9NYK5 338 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 SLAMF8Q9P0V8 285 aa12.6□□□□□ -0.39
CLSTN3-216ENST00000545663 A0A1B0GWA3 101 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 C5orf58C9J3I9 102 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 H3BSA7 217 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 SURF4O15260 269 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 HTR2AP28223 471 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 MVDP53602 400 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 MXRA7P84157 204 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 PSG4Q00888 419 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 CYP51A1Q16850 503 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 GTDC1Q4AE62 458 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 INTS11Q5TA45 600 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 CD276Q5ZPR3 534 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 UNQ6126/PRO20091Q6UXV3 157 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 DCDC5Q6ZRR9 648 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 MEPCEQ7L2J0 689 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 VMO1Q7Z5L0 202 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 ARHGAP24Q8N264 748 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 PNKDQ8N490 385 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 C10orf53Q8N6V4 93 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 SPERTQ8NA61 448 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 C11orf65Q8NCR3 313 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 VANGL1Q8TAA9 524 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 MCHR2Q969V1 340 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 CMBLQ96DG6 245 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 MEGF10Q96KG7 1140 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 ZNF607Q96SK3 696 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 ASCL2Q99929 193 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 SPATA5L1Q9BVQ7 753 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 KAT8Q9H7Z6 458 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 SMURF1Q9HCE7 757 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 SPAG4Q9NPE6 437 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 RPS6KB2Q9UBS0 482 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 DNAJB11Q9UBS4 358 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 TMCC3Q9ULS5 477 aa12.59□□□□□ -0.39
CLSTN3-216ENST00000545663 A0A0G2JPF8 293 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 HNRNPCL2B2RXH8 293 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 HNRNPCL3B7ZW38 293 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 H3BUX3 64 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 IFNL4K9M1U5 179 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 FXYD1O00168 92 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 FCN3O75636 299 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 PGA4P0DJD7 388 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 PGA3P0DJD8 388 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 HNRNPCL4P0DMR1 293 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 ADORA3P0DMS8 318 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 TAF11Q15544 211 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 KRT73Q86Y46 540 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 PGAM4Q8N0Y7 254 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 OR5AS1Q8N127 324 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 PNLDC1Q8NA58 520 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 PAPD5Q8NDF8 572 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 OR5R1Q8NH85 324 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC25A44Q96H78 314 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 CLPTM1LQ96KA5 538 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 C4orf45Q96LM5 186 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 ZNF347Q96SE7 839 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 WNT5BQ9H1J7 359 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 C1orf21Q9H246 121 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 BCL2L10Q9HD36 194 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 CCNB1IP1Q9NPC3 277 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
CLSTN3-216ENST00000545663 SERPINB7O75635 380 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 LYL1P12980 280 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms