RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 OR5K3A6NET4 321 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 PLPP1O14494 284 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 GPR37O15354 613 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 HSF1Q00613 529 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 DOC2BQ14184 412 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 TIGITQ495A1 244 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 ABHD17CQ6PCB6 329 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 CISD2Q8N5K1 135 aaKnown RBP14.09□□□□□ -0.15
CHD4-210ENST00000544040 SLC38A9Q8NBW4 561 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 SLC17A4Q9Y2C5 497 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 KIR2DS1A0A191URI9 304 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 LOC102723971A0A1B0GUV8 181 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 TMEM202A6NGA9 273 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 TMX2-CTNND1H3BSU7 103 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 ADH4P08319 380 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 EIF1P41567 113 aaKnown RBP14.09□□□□□ -0.15
CHD4-210ENST00000544040 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 H3F3AP84243 136 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 CDK5Q00535 292 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 KIR2DS1Q14954 304 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 SAXO2Q658L1 398 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 SLC22A12Q96S37 553 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 PARD6AQ9NPB6 346 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 A0A096LPE4 126 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 A0A1W2PPZ6 126 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 YKT6O15498 198 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 PRKNO60260 465 aaPredicted RBP14.09□□□□□ -0.15
CHD4-210ENST00000544040 MBP02144 154 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 PMCHP20382 165 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 SOX18P35713 384 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 NCR3LG1Q68D85 454 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 ADGRG3Q86Y34 549 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 HLA-CQ95604 372 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 CDCA3Q99618 268 aaPredicted RBP14.09□□□□□ -0.15
CHD4-210ENST00000544040 ARHGDIGQ99819 225 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 ZDHHC11Q9H8X9 412 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 FGF21Q9NSA1 209 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 NPPBP16860 134 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 PLXDC2Q6UX71 529 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 MAML2Q8IZL2 1156 aaPredicted RBP14.09□□□□□ -0.15
CHD4-210ENST00000544040 STRAPQ9Y3F4 350 aaKnown RBP14.09□□□□□ -0.15
CHD4-210ENST00000544040 A3GALT2U3KPV4 340 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 IGHV3-15A0A0B4J1V0 119 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 TCN2P20062 427 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 HOXC13P31276 330 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 DRAM2Q6UX65 266 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 OLIG1Q8TAK6 271 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 MARCH1Q8TCQ1 289 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 DYNC2LI1Q8TCX1 351 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 TMEM18Q96B42 140 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 BOD1Q96IK1 185 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 ACER3Q9NUN7 267 aa14.09□□□□□ -0.15
CHD4-210ENST00000544040 TOX4O94842 621 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 CD3DP04234 171 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 OR4E1P0C645 316 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 TAS2R45P59539 299 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 ISL1P61371 349 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 ALKBH6Q3KRA9 238 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 ZNF385BQ569K4 471 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 GNPNAT1Q96EK6 184 aaPredicted RBP14.08□□□□□ -0.15
CHD4-210ENST00000544040 DEFB127Q9H1M4 99 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 KIAA1456Q9P272 454 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 LAMP3Q9UQV4 416 aa14.08□□□□□ -0.15
CHD4-210ENST00000544040 C5orf49A4QMS7 147 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 XRCC2O43543 280 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 RPS16P62249 146 aaKnown RBP14.08□□□□□ -0.16
CHD4-210ENST00000544040 AANATQ16613 207 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 SIRT6Q8N6T7 355 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 MRPL43Q8N983 215 aaKnown RBP14.08□□□□□ -0.16
CHD4-210ENST00000544040 PHYHIPQ92561 330 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 MEIKINA0A087WXM9 373 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 SH2D1BO14796 132 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 NDUFB11Q9NX14 153 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 NUMBLQ9Y6R0 609 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 HMGN4O00479 90 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 RRASP10301 218 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 GNB2P62879 340 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 OPALINQ96PE5 141 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 EPHX3Q9H6B9 360 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 A0A1W2PNR3 127 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 SPNP16150 400 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 FGF7P21781 194 aa14.08□□□□□ -0.16
CHD4-210ENST00000544040 THOC3Q96J01 351 aaKnown RBP14.08□□□□□ -0.16
CHD4-210ENST00000544040 GDF2Q9UK05 429 aaPredicted RBP14.08□□□□□ -0.16
CHD4-210ENST00000544040 RCL1Q9Y2P8 373 aaKnown RBP14.08□□□□□ -0.16
CHD4-210ENST00000544040 ALOX12BO75342 701 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 IGHEP01854 428 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 PTBP1P26599 531 aaKnown RBP eCLIP14.07□□□□□ -0.161e-7■□□□□ 9.8
CHD4-210ENST00000544040 MORN1Q5T089 497 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 TMEM207Q6UWW9 146 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 MOB1BQ7L9L4 216 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 KIAA1958Q8N8K9 716 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 DHRS9Q9BPW9 319 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 HINT3Q9NQE9 182 aaKnown RBP14.07□□□□□ -0.16
CHD4-210ENST00000544040 MT-ATP6P00846 226 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 FAM157BP0CG42 384 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 FABP4P15090 132 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 CYB561P49447 251 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 FABP5Q01469 135 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms