RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 DHRS1Q96LJ7 313 aa11.08□□□□□ -0.64
RTN3-213ENST00000543552 ZNF582Q96NG8 517 aaPredicted RBP11.08□□□□□ -0.64
RTN3-213ENST00000543552 OR2V2Q96R30 315 aa11.08□□□□□ -0.64
RTN3-213ENST00000543552 COQ7Q99807 217 aa11.08□□□□□ -0.64
RTN3-213ENST00000543552 MRI1Q9BV20 369 aa11.08□□□□□ -0.64
RTN3-213ENST00000543552 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
RTN3-213ENST00000543552 IL20RAQ9UHF4 553 aa11.08□□□□□ -0.64
RTN3-213ENST00000543552 LRRC30A6NM36 301 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 RER1O15258 196 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 RGS9O75916 674 aaPredicted RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 GADD45GO95257 159 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 AVPP01185 164 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 SELEP16581 610 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 ADRA2CP18825 462 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 FPR3P25089 353 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 NOS3P29474 1203 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 SRP9P49458 86 aaKnown RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 COMPP49747 757 aaPredicted RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 SPIBQ01892 262 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 ECH1Q13011 328 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 CCDC92Q53HC0 331 aaPredicted RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 ESCO2Q56NI9 601 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 PTCHD4Q6ZW05 846 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 TSEN54Q7Z6J9 526 aaKnown RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 LRRC28Q86X40 367 aaPredicted RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 ATG16L2Q8NAA4 619 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 OR8G5Q8NG78 346 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 ITLN1Q8WWA0 313 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 SLC7A6Q92536 515 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 PYURFQ96I23 114 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 ERMAPQ96PL5 475 aaPredicted RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 SLC6A7Q99884 636 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 ELAC2Q9BQ52 826 aaKnown RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 HCAR1Q9BXC0 346 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 MYLK2Q9H1R3 596 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 POFUT1Q9H488 388 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 PATZ1Q9HBE1 687 aaKnown RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 OR5V1Q9UGF6 321 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 TMCC3Q9ULS5 477 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 LRCH1Q9Y2L9 728 aa11.07□□□□□ -0.64
RTN3-213ENST00000543552 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
RTN3-213ENST00000543552 ARPC3O15145 178 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 IDH3BO43837 385 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 OR10H3O60404 316 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 DIRAS1O95057 198 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 PPP1R3DO95685 299 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 CFPP27918 469 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 CDKN2AP42771 156 aaKnown RBP11.06□□□□□ -0.64
RTN3-213ENST00000543552 MMP16P51512 607 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 COX10Q12887 443 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 SEC23BQ15437 767 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 RFX4Q33E94 735 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
RTN3-213ENST00000543552 LEG1Q6P5S2 330 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 Q6ZR03 302 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.06□□□□□ -0.64
RTN3-213ENST00000543552 C1orf87Q8N0U7 546 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 OR5AS1Q8N127 324 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 OR2AJ1Q8NGZ0 328 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 GPA33Q99795 319 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 IFT27Q9BW83 186 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 CDADC1Q9BWV3 514 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 ZMAT3Q9HA38 289 aaKnown RBP11.06□□□□□ -0.64
RTN3-213ENST00000543552 DDX28Q9NUL7 540 aaKnown RBP11.06□□□□□ -0.64
RTN3-213ENST00000543552 NDE1Q9NXR1 346 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 PTTG3PQ9NZH4 202 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 OPN4Q9UHM6 478 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 NOP16Q9Y3C1 178 aaKnown RBP11.06□□□□□ -0.64
RTN3-213ENST00000543552 AUP1Q9Y679 476 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
RTN3-213ENST00000543552 DYSFO75923 2080 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 TMEM89A2RUT3 159 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 A8MXK9 166 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 TMEM178BH3BS89 294 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 FSHBP01225 129 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 FABP3P05413 133 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 DBHP09172 617 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 HSD17B1P14061 328 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 SLC6A9P48067 706 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 FXYD6P3P58550 94 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 HIST1H3AP68431 136 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 MALLQ13021 153 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 ZMYND11Q15326 602 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 SPATS1Q496A3 300 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 HIST2H3PS2Q5TEC6 136 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 OR2T2Q6IF00 324 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 RPL13AP3Q6NVV1 102 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 HIST2H3AQ71DI3 136 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 CPLX4Q7Z7G2 160 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 RNF148Q8N7C7 305 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 FAM86B1Q8N7N1 296 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 SLC26A10Q8NG04 563 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 OR10AD1Q8NGE0 317 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 NSMCE2Q96MF7 247 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 PITX2Q99697 317 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 FUZQ9BT04 418 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms