RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ALKBH2Q6NS38 261 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 LYG2Q86SG7 212 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ZNF695Q8IW36 515 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 PRSS35Q8N3Z0 413 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 LRRC18Q8N456 261 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 OR1J2Q8NGS2 313 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ANKRD9Q96BM1 317 aaPredicted RBP7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 MRPL38Q96DV4 380 aaKnown RBP7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 PBX4Q9BYU1 374 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 SLC17A5Q9NRA2 495 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ZNF223Q9UK11 482 aaPredicted RBP7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 A0A1B0GX78 115 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 FRG2CA6NGY1 282 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 TNFSF14O43557 240 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 SSX5O60225 188 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 P04436 131 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ADRA2AP08913 450 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 HOXC4P09017 264 aaPredicted RBP7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 CASRP41180 1078 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ACAA2P42765 397 aaKnown RBP7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 CLDN17P56750 224 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 C11orf87Q6NUJ2 197 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 MARCH1Q8TCQ1 289 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 RNF128Q8TEB7 428 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 MVB12AQ96EY5 273 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 VSTM2LQ96N03 204 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 SARGQ9BW04 601 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 OPN4Q9UHM6 478 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 FBXO4Q9UKT5 387 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 PCDHGA9Q9Y5G4 932 aaKnown RBP7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ANKRD34CP0C6C1 535 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 GABRA1P14867 456 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 PI3P19957 117 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 CX3CR1P49238 355 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 OR1D5P58170 312 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 PPP1CAP62136 330 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 DHRS2Q13268 280 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 MPPED2Q15777 294 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ISXQ2M1V0 245 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 C14orf28Q4W4Y0 310 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 PRAMEF20Q5VT98 475 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 TMEM200AQ86VY9 491 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 EXD3Q8N9H8 876 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 OR14L1PQ8NHC6 308 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 TCTEX1D2Q8WW35 142 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ZNF775Q96BV0 537 aaPredicted RBP7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 METTL9Q9H1A3 318 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 CHST11Q9NPF2 352 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 NTMQ9P121 344 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ASH2LQ9UBL3 628 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 ICAM5Q9UMF0 924 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 SLC5A6Q9Y289 635 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 LRP12Q9Y561 859 aa7.41□□□□□ -1.22
PRKAB1-207ENST00000542698 OR4C45A6NMZ5 311 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 GJE1A6NN92 205 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 SPINT1O43278 529 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 GNB3P16520 340 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 TBPP20226 339 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 CNR1P21554 472 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 AGFG1P52594 562 aaKnown RBP7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 MALLQ13021 153 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 AKR1C8PQ5T2L2 129 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 TRILQ7L0X0 811 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 KCNRGQ8N5I3 272 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 TMEM52Q8NDY8 209 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 FAM122AQ96E09 287 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 PGLYRP3Q96LB9 341 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 C1QTNF6Q9BXI9 259 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 B3GALT5Q9Y2C3 310 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 TPRP12270 2363 aaKnown RBP7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 HEATR5BQ9P2D3 2071 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 A0A1W2PPC4 97 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 SDCBPO00560 298 aaPredicted RBP7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 DDAH2O95865 285 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 WNT11O96014 354 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 CD27P26842 260 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 MSX1P28360 303 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 CCR5P51681 352 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 Q5BKY6 102 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 TMEM88Q6PEY1 159 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 FBXW12Q6X9E4 464 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 TERB2Q8NHR7 220 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 ZNF649Q9BS31 505 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 CNTNAP3Q9BZ76 1288 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
PRKAB1-207ENST00000542698 TRAV8-7A0A075B6U6 113 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 C4orf51C9J302 202 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 OR7C1O76099 320 aaPredicted RBP7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 EPPINO95925 133 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 RECKO95980 971 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 DBHP09172 617 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 EFNA3P52797 238 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 FLI1Q01543 452 aaPredicted RBP7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 MFGE8Q08431 387 aaPredicted RBP7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 PDZK1IP1Q13113 114 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 CNN3Q15417 329 aaKnown RBP7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 AVPI1Q5T686 147 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 OPN5Q6U736 354 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms