RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZNF593O00488 134 aaPredicted RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 EBAG9O00559 213 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 ABHD16AO95870 558 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 FASP25445 335 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 POLR2IP36954 125 aaKnown RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 CRISP1P54107 249 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 DSCR9P59020 149 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 EFNB1P98172 346 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 HLXQ14774 488 aaPredicted RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 PTGES3Q15185 160 aaKnown RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 ZNF718Q3SXZ3 478 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 KDM4DQ6B0I6 523 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 PLBD1Q6P4A8 553 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 CLEC2AQ6UVW9 174 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 COLCA1Q6ZS62 124 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 CPOQ8IVL8 374 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 ZNF786Q8N393 782 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 UBASH3BQ8TF42 649 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 NEU4Q8WWR8 484 aaPredicted RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 YIPF5Q969M3 257 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 CMBLQ96DG6 245 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 COQ7Q99807 217 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 PKP2Q99959 881 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 MS4A5Q9H3V2 200 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 ZNF556Q9HAH1 456 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 HINT3Q9NQE9 182 aaKnown RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 PAPOLBQ9NRJ5 636 aaKnown RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 TMEFF2Q9UIK5 374 aaPredicted RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 NDRG4Q9ULP0 352 aaKnown RBP8.3□□□□□ -1.08
YBX3-212ENST00000542002 POLR1DQ9Y2S0 133 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 COMMD3-BMI1R4GMX3 469 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 IGHV4-61A0A0C4DH41 118 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 LOC390937A0A1W2PQ73 354 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 ZSCAN5BA6NJL1 495 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 RIIAD1A6NNX1 92 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 C17orf100A8MU93 164 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 F5H5K5 113 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 M0R129 80 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 CIB2O75838 187 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 IFNGP01579 166 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 HEXAP06865 529 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 ACSM4P0C7M7 580 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 ZNF823P16415 610 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 GIFP27352 417 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 FMO3P31513 532 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 NR4A2P43354 598 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 ARHGDIAP52565 204 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 PRSS12P56730 875 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 CCL8P80075 99 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 RIN1Q13671 783 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 CARTPTQ16568 116 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 NKPD1Q17RQ9 610 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 TEX30Q5JUR7 227 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 Q6ZR03 302 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 DCXRQ7Z4W1 244 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 BCDIN3DQ7Z5W3 292 aaKnown RBP8.29□□□□□ -1.08
YBX3-212ENST00000542002 HIPK1Q86Z02 1210 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 TIGD4Q8IY51 512 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 PARP8Q8N3A8 854 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 OR6K6Q8NGW6 343 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 OR2AJ1Q8NGZ0 328 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 ST7LQ8TDW4 575 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 OTULINQ96BN8 352 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 HAVCR1Q96D42 359 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 CENPNQ96H22 339 aaPredicted RBP8.29□□□□□ -1.08
YBX3-212ENST00000542002 AMELYQ99218 206 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 PITX2Q99697 317 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 HDHD2Q9H0R4 259 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 OR51V1Q9H2C8 321 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 MARCH7Q9H992 704 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 ELOVL3Q9HB03 270 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 SLC25A19Q9HC21 320 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 MSL2Q9HCI7 577 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 SLCO1C1Q9NYB5 712 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 TVP23BQ9NYZ1 205 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 FBXO9Q9UK97 447 aaPredicted RBP8.29□□□□□ -1.08
YBX3-212ENST00000542002 OAZ3Q9UMX2 235 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 CACNG2Q9Y698 323 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 NF1P21359 2839 aa8.29□□□□□ -1.08
YBX3-212ENST00000542002 WNT9BO14905 357 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 SPRY3O43610 288 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 PRKYO43930 277 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 LILRA1O75019 489 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 GLCEO94923 617 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 IGHV1-46P01743 117 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 HMGN1P05114 100 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 SPARCP09486 303 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 ZNF23P17027 643 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 ZNF3P17036 446 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
YBX3-212ENST00000542002 SLC2A5P22732 501 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 GSTT1P30711 240 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 GCH1P30793 250 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 ENTPD1P49961 510 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 PDLIM4P50479 330 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 HCCSP53701 268 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 SELENOVP59797 346 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 LOXL1Q08397 574 aaPredicted RBP8.28□□□□□ -1.08
YBX3-212ENST00000542002 TRIP10Q15642 601 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 TSTQ16762 297 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms