RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 LINC00346Q8IVM7 164 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 TCEANCQ8N8B7 351 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
LTBR-209ENST00000541102 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 OR1J2Q8NGS2 313 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
LTBR-209ENST00000541102 PIMREGQ9BSJ6 248 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 OR51V1Q9H2C8 321 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 WDR76Q9H967 626 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 LHFPL6Q9Y693 200 aa12.22□□□□□ -0.45
LTBR-209ENST00000541102 LOC390937A0A1W2PQ73 354 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 M0R233 179 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 SYNGR3O43761 229 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 TLX2O43763 284 aaPredicted RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 LCKP06239 509 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 DAOP14920 347 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 APLNRP35414 380 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 GGT2P36268 569 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 GUCA1AP43080 201 aaPredicted RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 RAD23AP54725 363 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 MAD2L1BPQ15013 274 aaPredicted RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 ZNF774Q6NX45 483 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 CXXC5Q7LFL8 322 aaKnown RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 OR6K6Q8NGW6 343 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 OR2T4Q8NH00 348 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 ZMYND19Q96E35 227 aaPredicted RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 HRASLS5Q96KN8 279 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 OR2H1Q9GZK4 316 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 C1orf198Q9H425 327 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 FAM118AQ9NWS6 357 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 MYEF2Q9P2K5 600 aaKnown RBP12.21□□□□□ -0.45
LTBR-209ENST00000541102 ASH2LQ9UBL3 628 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 ORC6Q9Y5N6 252 aa12.21□□□□□ -0.45
LTBR-209ENST00000541102 A0A1W2PPW3 197 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 VWC2LB2RUY7 222 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 LYNX1G3V0Z9 82 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 NDUFS8O00217 210 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 RER1O15258 196 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 ATP6V1G2O95670 118 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 CLIC3O95833 236 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 HLA-DQA2P01906 255 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 LYNX1P0DP58 116 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 NR4A2P43354 598 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 EVX1P49640 407 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 ERVS71-1P61550 626 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 GLO1Q04760 184 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 APOFQ13790 326 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 ALKBH6Q3KRA9 238 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 KLHL12Q53G59 568 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 CCDC92Q53HC0 331 aaPredicted RBP12.2□□□□□ -0.46
LTBR-209ENST00000541102 AADACL4Q5VUY2 407 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 CYB5R2Q6BCY4 276 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 RGS7BPQ6MZT1 257 aaPredicted RBP12.2□□□□□ -0.46
LTBR-209ENST00000541102 DNM1P34Q6PK57 102 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 CFAP77Q6ZQR2 320 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 FAM81AQ8TBF8 368 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 TMEM163Q8TC26 289 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 UBASH3BQ8TF42 649 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 SLC7A6Q92536 515 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 PLEKHA8Q96JA3 519 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 PITX2Q99697 317 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 MS4A5Q9H3V2 200 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 MYOZ1Q9NP98 299 aaPredicted RBP12.2□□□□□ -0.46
LTBR-209ENST00000541102 SMPD3Q9NY59 655 aaPredicted RBP12.2□□□□□ -0.46
LTBR-209ENST00000541102 ENOPH1Q9UHY7 261 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 NDRG4Q9ULP0 352 aaKnown RBP12.2□□□□□ -0.46
LTBR-209ENST00000541102 COMMD3-BMI1R4GMX3 469 aa12.2□□□□□ -0.46
LTBR-209ENST00000541102 LOC100509620A0A075B734 347 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 A8MV72 311 aaPredicted RBP12.19□□□□□ -0.46
LTBR-209ENST00000541102 SELENOFO60613 162 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 CRLF1O75462 422 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 GLCEO94923 617 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 CLPTM1O96005 669 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 STOMP27105 288 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 RAD52P43351 418 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 GDI2P50395 445 aaKnown RBP12.19□□□□□ -0.46
LTBR-209ENST00000541102 HCCSP53701 268 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 UCP2P55851 309 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 SELENOVP59797 346 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
LTBR-209ENST00000541102 HIST1H3AP68431 136 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 RIPK1Q13546 671 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 HIST2H3PS2Q5TEC6 136 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 SLC18B1Q6NT16 456 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 HIST2H3AQ71DI3 136 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 OR10S1Q8NGN2 331 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 SYNPRQ8TBG9 265 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 MAP6Q96JE9 813 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 DNAJC27Q9NZQ0 273 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 TAAR3PQ9P1P4 343 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 CYB5R1Q9UHQ9 305 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 TIMM10BQ9Y5J6 103 aa12.19□□□□□ -0.46
LTBR-209ENST00000541102 IGHV4-61A0A0C4DH41 118 aa12.18□□□□□ -0.46
LTBR-209ENST00000541102 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
LTBR-209ENST00000541102 C5orf49A4QMS7 147 aa12.18□□□□□ -0.46
LTBR-209ENST00000541102 C12orf71A8MTZ7 269 aa12.18□□□□□ -0.46
LTBR-209ENST00000541102 NAT2P11245 290 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms