RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PNMTP11086 282 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZBTB25P24278 435 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 SERPINF1P36955 418 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC37A1P57057 533 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 TGIF1Q15583 401 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 RNASE10Q5GAN6 216 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC18B1Q6NT16 456 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 TTLL10Q6ZVT0 673 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 COX15Q7KZN9 410 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 CCDC107Q8WV48 283 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 DCUN1D4Q92564 292 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 GAREM1Q9H706 876 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 MLXQ9UH92 298 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 IGLV1-36A0A0B4J1U3 117 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 IGHV5-51A0A0C4DH38 117 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 TCRBV21S2A2A0A5A6 115 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 C9orf170A2RU37 121 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 H0YIZ8 118 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 STK17BO94768 372 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CBR1P16152 277 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 RAB3AP20336 220 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 NPY4RP50391 375 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 RIDAP52758 137 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PRMT2P55345 433 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 DLX2Q07687 328 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CCINQ13939 588 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ELOCQ15369 112 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 MPPED2Q15777 294 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ISXQ2M1V0 245 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PRTGQ2VWP7 1150 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 VWA2Q5GFL6 755 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PABPC1L2AQ5JQF8 200 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CLVS2Q5SYC1 327 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 HAGHLQ6PII5 290 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ADGRE4PQ86SQ3 457 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ARMC10Q8N2F6 343 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PAQR4Q8N4S7 273 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMEM229BQ8NBD8 167 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR13C9Q8NGT0 318 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR51F2Q8NH61 342 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ADAT3Q96EY9 351 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ARL5BQ96KC2 179 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PELOQ9BRX2 385 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 MRI1Q9BV20 369 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 BANF2Q9H503 90 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CKLFQ9UBR5 152 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 YBX2Q9Y2T7 364 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 FER1L5A0AVI2 2057 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMEM218A2RU14 115 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF705EA8MWA4 302 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 F8W036 122 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 RAB27BO00194 218 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF217O75362 1048 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 MYF5P13349 255 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CTSEP14091 401 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 BLOC1S1P78537 153 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 RBM39Q14498 530 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PAN3Q58A45 887 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 C9orf50Q5SZB4 431 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CATSPERDQ86XM0 798 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC43A2Q8N370 569 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR4A4PQ8NGN8 299 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC19A3Q9BZV2 496 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 HRH4Q9H3N8 390 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 TREM1Q9NP99 234 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PURGQ9UJV8 347 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 GDF2Q9UK05 429 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 KCNK7Q9Y2U2 307 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PRELID3BQ9Y3B1 194 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ATG2AQ2TAZ0 1938 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 PRRC2CQ9Y520 2896 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMEM269A0A1B0GVZ9 245 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF208O43345 1280 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF205O95201 554 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 HTR3BO95264 441 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 TXNDC12O95881 172 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CD8AP01732 235 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 GLAP06280 429 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CD1CP29017 333 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 FGL1Q08830 312 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 INPP5JQ15735 1006 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 HFEQ30201 348 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 C1orf189Q5VU69 101 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 CLEC9AQ6UXN8 241 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC29A4Q7RTT9 530 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZSCAN4Q8NAM6 433 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMEM104Q8NE00 496 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR5D18Q8NGL1 313 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 NUBPLQ8TB37 319 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 C12orf57Q99622 126 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR5AC2Q9NZP5 309 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 GLS2Q9UI32 602 aa9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 MRPS33Q9Y291 106 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-207ENST00000540998 A0A0D9SG52 128 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 SDCBPO00560 298 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 SIGLEC6O43699 453 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 CD2P06729 351 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 RCC1P18754 421 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms