RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RNASE12Q5GAN4 147 aaKnown RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 EMC4Q5J8M3 183 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 LRRC73Q5JTD7 316 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 HES5Q5TA89 166 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 FHL5Q5TD97 284 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF425Q6IV72 752 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 C11orf87Q6NUJ2 197 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 HAGHLQ6PII5 290 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 TMEM205Q6UW68 189 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 NHLRC1Q6VVB1 395 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 RPTNQ6XPR3 784 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 C17orf107Q6ZR85 190 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 ESPNLQ6ZVH7 1005 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 SSX6Q7RTT6 188 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 OLIG3Q7RTU3 272 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF550Q7Z398 422 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 C17orf82Q86X59 251 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 IZUMO1Q8IYV9 350 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 BEST3Q8N1M1 668 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 CISD2Q8N5K1 135 aaKnown RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 SLC16A11Q8NCK7 471 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 NPEPL1Q8NDH3 523 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 SLC30A7Q8NEW0 376 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 TMEM185AQ8NFB2 350 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 OR4K14Q8NGD5 310 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 OR4C16Q8NGL9 310 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 OR5M8Q8NGP6 311 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 OR13C2Q8NGS9 318 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 OR9A2Q8NGT5 310 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 ZFPM2Q8WW38 1151 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 SAT2Q96F10 170 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 PEX11GQ96HA9 241 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 SMIM10Q96HG1 83 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 WDR92Q96MX6 357 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 TSNAXQ99598 290 aaKnown RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 TIMM29Q9BSF4 260 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 KLHL31Q9H511 634 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 RNF122Q9H9V4 155 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 MRPS30Q9NP92 439 aaKnown RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 MEPEQ9NQ76 525 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 ZFP57Q9NU63 452 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 SLC2A8Q9NY64 477 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 COMMD9Q9P000 198 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 MRPL15Q9P015 296 aaKnown RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF629Q9UEG4 869 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 PISDQ9UG56 409 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 MRTO4Q9UKD2 239 aaKnown RBP6.88□□□□□ -1.31
CCDC60-204ENST00000539847 CLEC4AQ9UMR7 237 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 NTNG1Q9Y2I2 539 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 BSNQ9UPA5 3926 aa6.88□□□□□ -1.31
CCDC60-204ENST00000539847 URADA6NGE7 173 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 PRR19A6NJB7 356 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TMEM212A6NML5 194 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 EFCAB7A8K855 629 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 C9orf172C9J069 976 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 DOK2O60496 412 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 CDC40O60508 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 ZFPL1O95159 310 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 PPP1R3DO95685 299 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TXNDC12O95881 172 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 CBX7O95931 251 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 WNT11O96014 354 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TNFP01375 233 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 RLN1P04808 185 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 MRPL3P09001 348 aaKnown RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 OR4E1P0C645 316 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 SLC35G4P0C7Q5 338 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 PVALBP20472 110 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF10P21506 573 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 CMPK1P30085 196 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 RPS15AP62244 130 aaKnown RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 POLR2GP62487 172 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 ERVK-25P63136 954 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 EIF5AP63241 154 aaKnown RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 SORDQ00796 357 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 EGR3Q06889 387 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 RASGEF1BQ0VAM2 473 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 MEF2DQ14814 521 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TGIF1Q15583 401 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 HMGN3Q15651 99 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 GPR68Q15743 365 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 DUSP5Q16690 384 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 C2orf68Q2NKX9 166 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 C14orf28Q4W4Y0 310 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 LY6G6FQ5SQ64 297 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 AVPI1Q5T686 147 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 PHF19Q5T6S3 580 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 AWAT2Q6E213 333 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 FAM166AQ6J272 317 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 STEAP1BQ6NZ63 245 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 ULK3Q6PHR2 472 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 OR2W3Q7Z3T1 314 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 SERPINA12Q8IW75 414 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 ZDHHC22Q8N966 263 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 LMNTD1Q8N9Z9 388 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 LINC01555Q8NAE3 123 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 RCBTB1Q8NDN9 531 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 OR7G2Q8NG99 324 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms