RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 DCAF7P61962 342 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 MFSD13AQ14CX5 517 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 C3orf33Q6P1S2 294 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 RHOUQ7L0Q8 258 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 GALNT11Q8NCW6 608 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 OR13C8Q8NGS7 320 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 OR6C1Q96RD1 312 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 DHRS9Q9BPW9 319 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 REG4Q9BYZ8 158 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 WDR13Q9H1Z4 485 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 TTYH1Q9H313 450 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-210ENST00000539599 SDHAF2Q9NX18 166 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 LOC105371267A0A1B0GV96 52 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF735P0CB33 412 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 ARHGDIBP52566 201 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 WDR45BQ5MNZ6 344 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 PRAMEF20Q5VT98 475 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-210ENST00000539599 STPG2Q8N412 459 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 BPIFB2Q8N4F0 458 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 PAQR4Q8N4S7 273 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF248Q8NDW4 579 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 MRGPRFQ96AM1 343 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
UBE3B-210ENST00000539599 KCNK17Q96T54 332 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 VSIG4Q9Y279 399 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 KCNMB2Q9Y691 235 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 FAM25EA8MYX2 175 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 TTRP02766 147 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 NUDT1P36639 197 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 MECP2P51608 486 aaKnown RBP12.52□□□□□ -0.4
UBE3B-210ENST00000539599 TDGQ13569 410 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 CDNFQ49AH0 187 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 ANKRD37Q7Z713 158 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 ADGRE4PQ86SQ3 457 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 FJX1Q86VR8 437 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 COMMD2Q86X83 199 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 STEAP2Q8NFT2 490 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 OR51E1Q8TCB6 317 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 MVB12AQ96EY5 273 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF319Q9P2F9 582 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 KCNN3Q9UGI6 736 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 RHBDD3Q9Y3P4 386 aa12.52□□□□□ -0.4
UBE3B-210ENST00000539599 DCNP07585 359 aaKnown RBP12.52□□□□□ -0.41
UBE3B-210ENST00000539599 HEXBP07686 556 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 DHODHQ02127 395 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 GUSBP11Q6P575 273 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 PAPD4Q6PIY7 484 aaKnown RBP12.52□□□□□ -0.41
UBE3B-210ENST00000539599 H1FNTQ75WM6 255 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-210ENST00000539599 NUP54Q7Z3B4 507 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 SLAMF6Q96DU3 332 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 B3GAT1Q9P2W7 334 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 GDF2Q9UK05 429 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-210ENST00000539599 A0A1B0GTQ1 180 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 hCG_1807616A0A1W2PRN6 198 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF736B4DX44 427 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-210ENST00000539599 G3V3Y1 287 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 RP2O75695 350 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 OR2J2O76002 312 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 CYB5AP00167 134 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 ITGB2P05107 769 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 CRABP1P29762 137 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 AVPR2P30518 371 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 MYBPHQ13203 477 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 DHRS2Q13268 280 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 TUSC1Q2TAM9 212 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 TRAPPC6BQ86SZ2 158 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 NPRL2Q8WTW4 380 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 CASTOR1Q8WTX7 329 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 ST8SIA4Q92187 359 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
UBE3B-210ENST00000539599 RPH3AQ9Y2J0 694 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-210ENST00000539599 E9PLN8 166 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 NUDT21O43809 227 aaKnown RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 GABRA1P14867 456 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 PTGS2P35354 604 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 PRSS12P56730 875 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF660Q6AZW8 331 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 GSG1LQ6UXU4 331 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 ADAD2Q8NCV1 583 aaKnown RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 OR5D18Q8NGL1 313 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 OR6M1Q8NGM8 313 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 RADILQ96JH8 1075 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 BANF2Q9H503 90 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 NOP16Q9Y3C1 178 aaKnown RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 NCOA6Q14686 2063 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 RER1O15258 196 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 HLA-AP01891 365 aaKnown RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 GLULP15104 373 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 GLB1P16278 677 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 TAS2R19P59542 299 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 NAA40Q86UY6 237 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 DTX1Q86Y01 620 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 NFAM1Q8NET5 270 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 POC1BQ8TC44 478 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF75AQ96N20 296 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 SELENOIQ9C0D9 397 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms