RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC22A23A1A5C7 686 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 PROB1E7EW31 1015 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 NPIPA5E9PKD4 350 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 M0R233 179 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 SULT2B1O00204 365 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 NKX2-8O15522 239 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 SLC16A7O60669 478 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 RAMP1O60894 148 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 HRGP04196 525 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 ADRB1P08588 477 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 CNR1P21554 472 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 CCR9P51686 369 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 BLVRAP53004 296 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 LINGO2Q7L985 606 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 ST8SIA4Q92187 359 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 DERL3Q96Q80 235 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 TSPAN10Q9H1Z9 355 aaPredicted RBP15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 WDR76Q9H967 626 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 VSX1Q9NZR4 365 aaPredicted RBP15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 NPIPA1Q9UND3 350 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 hCG_1807616A0A1W2PRN6 198 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 GATBO75879 557 aaKnown RBP15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 TGM6O95932 706 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 ACSM4P0C7M7 580 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 CTLA4P16410 223 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 FKBP2P26885 142 aaKnown RBP15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 RPS27P42677 84 aaKnown RBP15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 SIRPAP78324 504 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 ZMYND11Q15326 602 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 TMPPEQ6ZT21 453 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 Q6ZTK2 550 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 GALNT16Q8N428 558 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 FBXW5Q969U6 566 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 MIB2Q96AX9 1013 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 EMC6Q9BV81 110 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 HRASLSQ9HDD0 168 aa15.21■□□□□ 0.03
PCDHB17P-201ENST00000539533 CFAP47Q6ZTR5 3102 aa15.21■□□□□ 0.02
PCDHB17P-201ENST00000539533 PCP4L1A6NKN8 68 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 PSMD9O00233 223 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 PRAF2O60831 178 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZP3P21754 424 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 SRD5A2P31213 254 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 VEGFCP49767 419 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 B3GALT5-AS1P59052 145 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 ACTA2P62736 377 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 ACTG2P63267 376 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 FOXO1Q12778 655 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR1C1Q15619 314 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 TMEM255AQ5JRV8 349 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 NHLRC1Q6VVB1 395 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 SYS1Q8N2H4 156 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR14L1PQ8NHC6 308 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 SNX33Q8WV41 574 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 CMTM3Q96MX0 182 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 PLEKHA1Q9HB21 404 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 FANCFQ9NPI8 374 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 TRBV2A0A0J9YWF9 115 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 A0A1W2PNV4 684 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 PRR32B1ATL7 298 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 WT1P19544 449 aaPredicted RBP15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 PSMB1P20618 241 aaKnown RBP15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 CASRP41180 1078 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 CENPAP49450 140 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 DAP3P51398 398 aaKnown RBP15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 TSPAN5P62079 268 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 TMEM225Q6GV28 225 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 CFAP77Q6ZQR2 320 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 SLC16A9Q7RTY1 509 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 GCDHQ92947 438 aaPredicted RBP15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 PIGQQ9BRB3 760 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR10A4Q9H209 315 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 ABI3Q9P2A4 366 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 KLHDC2Q9Y2U9 406 aa15.2■□□□□ 0.02
PCDHB17P-201ENST00000539533 H0YC42 278 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 TRAPPC6AO75865 159 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZNF17P17021 662 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 RFC3P40938 356 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 RPL22L1Q6P5R6 122 aaKnown RBP15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 IGF2-ASQ6U949 168 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 UXS1Q8NBZ7 420 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 PDCD1LG2Q9BQ51 273 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 IGLV1-36A0A0B4J1U3 117 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 ANKRD61A6NGH8 418 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 EDNRAP25101 427 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 BIDP55957 195 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 FMODQ06828 376 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 WIPI1Q5MNZ9 446 aaPredicted RBP15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 METTL11BQ5VVY1 283 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 DPY19L4Q7Z388 723 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR52I2Q8NH67 350 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 KCNK17Q96T54 332 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 CHIAQ9BZP6 476 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 GNG8Q9UK08 70 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 ING1Q9UK53 422 aaPredicted RBP15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 KCNMB2Q9Y691 235 aa15.19■□□□□ 0.02
PCDHB17P-201ENST00000539533 A0A0J9YW62 118 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 A0A1B0GUH1 482 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 A6NIZ1 184 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ECDO95905 644 aaPredicted RBP15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 HLA-DQA2P01906 255 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms