RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 APOFQ13790 326 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 OR2AJ1Q8NGZ0 328 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 ST7LQ8TDW4 575 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 PLEKHA8Q96JA3 519 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 IL4I1Q96RQ9 567 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 PITX2Q99697 317 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 COQ7Q99807 217 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 KLHDC2Q9Y2U9 406 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 TRIM64A6NGJ6 449 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 TRIM64BA6NI03 449 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 SSX4O60224 188 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 ADRA2AP08913 450 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 PAICSP22234 425 aaKnown RBP13.49□□□□□ -0.25
RPAIN-206ENST00000539417 NAA10P41227 235 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-206ENST00000539417 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 PPP1CBP62140 327 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 TEX30Q5JUR7 227 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 AADACL4Q5VUY2 407 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 DPY19L4Q7Z388 723 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 TGIF2LYQ8IUE0 185 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 C10orf67Q8IYJ2 551 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 CIARTQ8N365 385 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-206ENST00000539417 OR6N2Q8NGY6 317 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 IPCEF1Q8WWN9 437 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-206ENST00000539417 STMN2Q93045 179 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 TRMT61AQ96FX7 289 aaKnown RBP13.49□□□□□ -0.25
RPAIN-206ENST00000539417 Q96MF0 132 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 INTS14Q96SY0 518 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 ATF6BQ99941 703 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 VRK1Q99986 396 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-206ENST00000539417 BCL2L14Q9BZR8 327 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 HDHD2Q9H0R4 259 aa13.49□□□□□ -0.25
RPAIN-206ENST00000539417 EIF3KQ9UBQ5 218 aaKnown RBP13.49□□□□□ -0.25
RPAIN-206ENST00000539417 IGLV3-9A0A075B6K5 115 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 ACSM4P0C7M7 580 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 NAT2P11245 290 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 ANPEPP15144 967 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 PRSS12P56730 875 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 RPS23P62266 143 aaKnown RBP13.48□□□□□ -0.25
RPAIN-206ENST00000539417 RCN1Q15293 331 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 SHEQ5VZ18 495 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 LPCAT4Q643R3 524 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 SYNPRQ8TBG9 265 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 KLF14Q8TD94 323 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-206ENST00000539417 SLAMF6Q96DU3 332 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 TEAD3Q99594 435 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 TOR3AQ9H497 397 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 TAAR3PQ9P1P4 343 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 AASSQ9UDR5 926 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 PMF1-BGLAPU3KQ54 211 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 F5H5K5 113 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 DLGAP1O14490 977 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 PRODHO43272 600 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 MRPL3P09001 348 aaKnown RBP13.48□□□□□ -0.25
RPAIN-206ENST00000539417 EVX1P49640 407 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 PPOXP50336 477 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 RPS7P62081 194 aaKnown RBP13.48□□□□□ -0.25
RPAIN-206ENST00000539417 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
RPAIN-206ENST00000539417 DNM1P46Q6ZS02 220 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 LURAP1LQ8IV03 231 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 ZNF525Q8N782 197 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 C9orf16Q9BUW7 83 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 ABHD6Q9BV23 337 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 CENPMQ9NSP4 180 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 TBCCD1Q9NVR7 557 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 ATPIF1Q9UII2 106 aa13.48□□□□□ -0.25
RPAIN-206ENST00000539417 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
RPAIN-206ENST00000539417 A0A1W2PPW3 197 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 VSTM5A8MXK1 200 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 PRR32B1ATL7 298 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 KLF3P57682 345 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-206ENST00000539417 ELF3P78545 371 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-206ENST00000539417 PSG7Q13046 419 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 HNRNPA0Q13151 305 aaKnown RBP13.47□□□□□ -0.25
RPAIN-206ENST00000539417 HLXQ14774 488 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-206ENST00000539417 LRRC36Q1X8D7 754 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 CLEC12BQ2HXU8 276 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 PRSS57Q6UWY2 283 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 ZBTB49Q6ZSB9 765 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 EME1Q96AY2 570 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 TMUB1Q9BVT8 246 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 TEX12Q9BXU0 123 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 ELOVL3Q9HB03 270 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 DYNLRB1Q9NP97 96 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 DDX28Q9NUL7 540 aaKnown RBP13.47□□□□□ -0.25
RPAIN-206ENST00000539417 PTTG3PQ9NZH4 202 aa13.47□□□□□ -0.25
RPAIN-206ENST00000539417 CHD3Q12873 2000 aaKnown RBP13.46□□□□□ -0.25
RPAIN-206ENST00000539417 F12P00748 615 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-206ENST00000539417 IGHV3-13P01766 116 aa13.46□□□□□ -0.25
RPAIN-206ENST00000539417 SLC2A1P11166 492 aa13.46□□□□□ -0.25
RPAIN-206ENST00000539417 PRKXP51817 358 aa13.46□□□□□ -0.25
RPAIN-206ENST00000539417 EFNA4P52798 201 aa13.46□□□□□ -0.25
RPAIN-206ENST00000539417 BLVRAP53004 296 aa13.46□□□□□ -0.25
RPAIN-206ENST00000539417 NUDT6P53370 316 aa13.46□□□□□ -0.25
RPAIN-206ENST00000539417 TNK1Q13470 666 aa13.46□□□□□ -0.25
RPAIN-206ENST00000539417 SNAI3Q3KNW1 292 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms