RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 AGAP20933 346 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SLC6A6P31641 620 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 UQCRC1P31930 480 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 CEACAM8P31997 349 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 S100A5P33763 92 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 UGT2B10P36537 528 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TGFBR2P37173 567 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 AQP2P41181 271 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 MAP2K4P45985 399 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 OMPP47874 163 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 IST1P53990 364 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 CLDN17P56750 224 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 VBP1P61758 197 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 NCS1P62166 190 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 LSM3P62310 102 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ADORA2A-AS1P86434 159 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 FOXF2Q12947 444 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 PPP1R8Q12972 351 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TSPAN31Q12999 210 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SLC17A1Q14916 467 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 MAD2L1BPQ15013 274 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TBCEQ15813 527 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 KCNJ8Q15842 424 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SLC25A35Q3KQZ1 300 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF404Q494X3 552 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ALG10Q5BKT4 473 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 FAM209BQ5JX69 171 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 UBE2UQ5VVX9 321 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SLX4IPQ5VYV7 408 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 CARD17Q5XLA6 110 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 FAM205BPQ63HN1 556 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 THOC7Q6I9Y2 204 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 C1orf94Q6P1W5 598 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 PGBD2Q6P3X8 592 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF620Q6ZNG0 422 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 AAED1Q7RTV5 226 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SLC46A3Q7Z3Q1 461 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ABHD12BQ7Z5M8 362 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ZER1Q7Z7L7 766 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 MEX3DQ86XN8 651 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 CCDC71Q8IV32 467 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 LIX1LQ8IVB5 337 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TUSC5Q8IXB3 177 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 HS3ST5Q8IZT8 346 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 KDM8Q8N371 416 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 GPR137CQ8N3F9 429 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 NAXEQ8NCW5 288 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 OR9Q2Q8NGE9 314 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 OR4C15Q8NGM1 316 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TEX47Q8TBZ9 253 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 GNPDA2Q8TDQ7 276 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SSC4DQ8WTU2 575 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 LIPHQ8WWY8 451 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 MYDGFQ969H8 173 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TMEM45BQ96B21 275 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ADAD1Q96M93 576 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 FEVQ99581 238 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 FUZQ9BT04 418 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TEX12Q9BXU0 123 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 GABARAPL3Q9BY60 117 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 POLDIP3Q9BY77 421 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SLIRPQ9GZT3 109 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 DCSTAMPQ9H295 470 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 DUSP21Q9H596 190 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 KCNJ16Q9NPI9 418 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ACOT13Q9NPJ3 140 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 B3GAT2Q9NPZ5 323 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ABCB10Q9NRK6 738 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 KRT84Q9NSB2 600 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ASB6Q9NWX5 421 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 VNN3Q9NY84 501 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 NPAP1Q9NZP6 1156 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 C11orf21Q9P2W6 132 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 B3GAT1Q9P2W7 334 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 GRHPRQ9UBQ7 328 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 UPB1Q9UBR1 384 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SEC14L4Q9UDX3 406 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 PROCRQ9UNN8 238 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 MGAT4BQ9UQ53 548 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 RNF6Q9Y252 685 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 RCE1Q9Y256 329 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 SIGLEC7Q9Y286 467 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 UGT2A1Q9Y4X1 527 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 MAGED1Q9Y5V3 778 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 FLVCR1Q9Y5Y0 555 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ATMQ13315 3056 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 FAM172BPA6NC97 362 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 A6NIZ1 184 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 METTL15A6NJ78 407 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 NPIPB13A6NJU9 1138 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RIIAD1A6NNX1 92 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 NPIPB4C9JG80 1138 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF587BE7ETH6 402 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 LOC110117498-PIK3R3F6TDL0 507 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 MS4A18H0YCH9 400 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 PSMD9O00233 223 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 MGST3O14880 152 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TRAF3IP2O43734 574 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 IDH3BO43837 385 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms