RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MPGP29372 298 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 CA7P43166 264 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 KIR2DL2P43627 348 aaPredicted RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 MTCP1P56278 107 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PCBD1P61457 104 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 SLC17A1Q14916 467 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF718Q3SXZ3 478 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF826PQ6ZT77 177 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 RNF113BQ8IZP6 322 aaKnown RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 PLPP7Q8NBV4 271 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 OR4C15Q8NGM1 316 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 VKORC1Q9BQB6 163 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 POTEKPQ9BYX7 375 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 SLCO1C1Q9NYB5 712 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF391Q9UJN7 358 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PIGLQ9Y2B2 252 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 TEX15Q9BXT5 2789 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 IGHV3OR15-7A0A075B7D8 119 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 TRAV39A0A0B4J263 110 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 MS4A18H0YCH9 400 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PRSS23O95084 383 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 CDRT1O95170 752 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 MPIG6BO95866 241 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF121P58317 390 aaPredicted RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 CDSNQ15517 529 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 OR8G1Q15617 311 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 MS4A18Q3C1V0 323 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PHYHD1Q5SRE7 291 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 FAM27D1Q5T7N8 215 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 HES5Q5TA89 166 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 C22orf42Q6IC83 251 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 UNQ6126/PRO20091Q6UXV3 157 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 GPR141Q7Z602 305 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 C17orf47Q8NEP4 570 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 OR4M1Q8NGD0 313 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 OR56B2PQ8NGI1 322 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 SLC25A40Q8TBP6 338 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 NRG4Q8WWG1 115 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PRSS27Q9BQR3 290 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 OR10A2Q9H208 303 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF442Q9H7R0 627 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 CGGBP1Q9UFW8 167 aaPredicted RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 GSTK1Q9Y2Q3 226 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 MED12LQ86YW9 2145 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 A0A1W2PQD3 144 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 M0R233 179 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 AQP7O14520 342 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 NXPH2O95156 264 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 IGHV1-2P23083 117 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 INSL4Q14641 139 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 KLHL22Q53GT1 634 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 EMC4Q5J8M3 183 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 KHDC1LQ5JSQ8 128 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PRAMEF6Q5VXH4 476 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF474Q6S9Z5 364 aaPredicted RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 YTHDF3Q7Z739 585 aaKnown RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 C20orf196Q8IYI0 205 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 MUC15Q8N387 334 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZSCAN4Q8NAM6 433 aaPredicted RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 CCDC107Q8WV48 283 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ACKR4Q9NPB9 350 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 SLC52A3Q9NQ40 469 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 DAPK2Q9UIK4 370 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 STARD10Q9Y365 291 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 LOC102725191A0A1B0GVB3 256 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 A0A1W2PQL4 384 aaPredicted RBP6.34□□□□□ -1.39
MSH6-209ENST00000538136 MYL9P24844 172 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 OMPP47874 163 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 MEPCEQ7L2J0 689 aaKnown RBP6.34□□□□□ -1.39
MSH6-209ENST00000538136 SNX29P2Q8IUI4 249 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 PSMA8Q8TAA3 256 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 RFESDQ8TAC1 157 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 SYNPRQ8TBG9 265 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 TRMT61AQ96FX7 289 aaKnown RBP6.34□□□□□ -1.39
MSH6-209ENST00000538136 CHST6Q9GZX3 395 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 NOX3Q9HBY0 568 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 FAM53CQ9NYF3 392 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 FAM215AQ9Y5M1 114 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 ZNF99A8MXY4 864 aaPredicted RBP6.34□□□□□ -1.39
MSH6-209ENST00000538136 MSTNO14793 375 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 ZNF208O43345 1280 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 TFF1P04155 84 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 PRF1P14222 555 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 RPA2P15927 270 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 PSMA1P25786 263 aaKnown RBP6.34□□□□□ -1.39
MSH6-209ENST00000538136 SRP14P37108 136 aaKnown RBP6.34□□□□□ -1.39
MSH6-209ENST00000538136 GPM6AP51674 278 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 FTMTQ8N4E7 242 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 TPRX1Q8N7U7 411 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 FGFBP3Q8TAT2 258 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 STARD4Q96DR4 205 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 SEH1LQ96EE3 360 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 ZNF488Q96MN9 340 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 SLC19A3Q9BZV2 496 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 BANF2Q9H503 90 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 MAN2C1Q9NTJ4 1040 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 ZNF701Q9NV72 531 aaPredicted RBP6.34□□□□□ -1.39
MSH6-209ENST00000538136 MCUBQ9NWR8 336 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 PCDHGB5Q9Y5G0 923 aa6.34□□□□□ -1.39
MSH6-209ENST00000538136 SORL1Q92673 2214 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms