RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 OR5AC1P0C628 307 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 HOXD9P28356 352 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 IDH3GP51553 393 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SIRPAP78324 504 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 GFI1BQ5VTD9 330 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 C17orf64Q86WR6 236 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 TMPRSS12Q86WS5 348 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 ARL14Q8N4G2 192 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 OR5P2Q8WZ92 322 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 MYNNQ9NPC7 610 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SLCO1B1Q9Y6L6 691 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 TRDCB7Z8K6 153 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 J3QRE1 110 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 FOXE1O00358 373 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 CYB5AP00167 134 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 CD82P27701 267 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 UBE2KP61086 200 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 DEGS2Q6QHC5 323 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF620Q6ZNG0 422 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 VRK2Q86Y07 508 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 OR13C8Q8NGS7 320 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF514Q96K75 400 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BLQ99880 126 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 URM1Q9BTM9 101 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 DUSP23Q9BVJ7 150 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 MED20Q9H944 212 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 TPRP12270 2363 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 MUC6Q6W4X9 2439 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 ZC3H12DA2A288 527 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 CPSF4LA6NMK7 179 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 H0YIV9 168 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 MELTFP08582 738 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 CX3CR1P49238 355 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 H3F3AP84243 136 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 LEMD1Q68G75 181 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 AMZ2Q86W34 360 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 THOC6Q86W42 341 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 NXPE1Q8N323 547 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 OR9A4Q8NGU2 314 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 OR10G6Q8NH81 332 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 NEIL2Q969S2 332 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 ADGRG7Q96K78 797 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 LUZP4Q9P127 313 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 MRPS33Q9Y291 106 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 PRSS21Q9Y6M0 314 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 FAM186AA6NE01 2351 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 ALPK3Q96L96 1907 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 SRPX2O60687 465 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 ATP1B2P14415 290 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 CD27P26842 260 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 CD1CP29017 333 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC6A9P48067 706 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 CAMLGP49069 296 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 MC1RQ01726 317 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 ULK3Q6PHR2 472 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 NTNG2Q96CW9 530 aa9.84□□□□□ -0.83
CLSTN3-207ENST00000537408 C20orf202A1L168 122 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 C9JQL5 133 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC16A5O15375 505 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 OGG1O15527 345 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 GPR3P46089 330 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 RGRP47804 291 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 RPL29P47914 159 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 SGSHP51688 502 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 EBPQ15125 230 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 RNF151Q2KHN1 245 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF573Q86YE8 665 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 C1orf87Q8N0U7 546 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC35G3Q8N808 338 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 OR9K2Q8NGE7 335 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC2A12Q8TD20 617 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 MOAP1Q96BY2 351 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 THOC3Q96J01 351 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC35G5Q96KT7 338 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 PRRT1Q99946 306 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 C1QTNF2Q9BXJ5 285 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 CXorf36Q9H7Y0 433 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 GLRX2Q9NS18 164 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 PCYT1BQ9Y5K3 369 aaPredicted RBP9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 PRH1P02810 166 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 OR8U9P0C7N5 309 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 OR13C7P0DN81 318 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 ARF5P84085 180 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 FZD5Q13467 585 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 ENPP2Q13822 863 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 OR8U1Q8NH10 309 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 SMIM14Q96QK8 99 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 IL17CQ9P0M4 197 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 ST6GALNAC2Q9UJ37 374 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 AMDHD2Q9Y303 409 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 CDC40O60508 579 aaKnown RBP eCLIP9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 PPP1R3DO95685 299 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 TRGC2P03986 189 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 SFTPBP07988 381 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 JMJD7P0C870 316 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 ACRV1P26436 265 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 GRK6P43250 576 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 CDKN1BP46527 198 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms