RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TOXO94900 526 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 ISG15P05161 165 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 LAP3P28838 519 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 SSTR2P30874 369 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 EIF1P41567 113 aaKnown RBP11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CLRN1P58418 232 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 PCGF3Q3KNV8 242 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CARD17Q5XLA6 110 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF626Q68DY1 528 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 MEIOBQ8N635 442 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 TMEM105Q8N8V8 129 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 OR10S1Q8NGN2 331 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 OR13C3Q8NGS6 347 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 SLAMF6Q96DU3 332 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 DPCDQ9BVM2 203 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF160Q9HCG1 818 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 MGAT4CQ9UBM8 478 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF69Q9UC07 566 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CDV3Q9UKY7 258 aaKnown RBP11.89□□□□□ -0.51
VPS33B-202ENST00000535906 A0A1W2PPL8 197 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 KDM4BO94953 1096 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CSF1P09603 554 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CDAP32320 146 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 RAB11BQ15907 218 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 FTMTQ8N4E7 242 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 NOXO1Q8NFA2 376 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 OR10H5Q8NGA6 315 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 SLC25A43Q8WUT9 341 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-202ENST00000535906 SLC25A28Q96A46 364 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 ZBTB8AQ96BR9 441 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 OXGR1Q96P68 337 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 NECAB3Q96P71 396 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-202ENST00000535906 SLC17A5Q9NRA2 495 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 PIPOXQ9P0Z9 390 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CKLFQ9UBR5 152 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 HDGFL3Q9Y3E1 203 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 AUP1Q9Y679 476 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 NSG1A0A0A6YYJ2 146 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 LOC100289279A0A1B0GTE1 492 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 CIB4A0PJX0 185 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 SULT2B1O00204 365 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 P2RY10O00398 339 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 MPC2O95563 127 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 IFNA7P01567 189 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 IGHG1P01857 330 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 GIPP09681 153 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 FSTP19883 344 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 RGS19P49795 217 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 MMP16P51512 607 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 SSR4P51571 173 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 RBMS2Q15434 407 aaKnown RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 GLYATL3Q5SZD4 288 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 ANGPTL4Q9BY76 406 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 SEC61A2Q9H9S3 476 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 FAM206AQ9NX38 181 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 CGGBP1Q9UFW8 167 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 MRPS18BQ9Y676 258 aaKnown RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 TMEM272A0A1B0GTI8 110 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 DCDC2BA2VCK2 349 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 AQP7P3A6NL99 342 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 PYCARD-AS1I3L0S3 204 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF43P17038 809 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 ACHEP22303 614 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 FOLR3P41439 243 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 TSPAN5P62079 268 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 RPS18P62269 152 aaKnown RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 DHODHQ02127 395 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 SPOCK1Q08629 439 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 TMEM81Q6P7N7 255 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF704Q6ZNC4 412 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 CFAP77Q6ZQR2 320 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 RPS19BP1Q86WX3 136 aaKnown RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 GTPBP8Q8N3Z3 284 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 UXS1Q8NBZ7 420 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 OR4C16Q8NGL9 310 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 OR6X1Q8NH79 312 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 PAQR8Q8TEZ7 354 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 CHIAQ9BZP6 476 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 SH2D2AQ9NP31 389 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 CA10Q9NS85 328 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 PISDQ9UG56 409 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 LHFPL6Q9Y693 200 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 COL27A1Q8IZC6 1860 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-202ENST00000535906 CNTRLQ7Z7A1 2325 aa11.88□□□□□ -0.51
VPS33B-202ENST00000535906 OR2A4O95047 310 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 GP1BAP07359 652 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 ACP1P24666 158 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 DNASE1L1P49184 302 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 PSMA6P60900 246 aaKnown RBP11.87□□□□□ -0.51
VPS33B-202ENST00000535906 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
VPS33B-202ENST00000535906 TOMM20Q15388 145 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-202ENST00000535906 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 TMPPEQ6ZT21 453 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 ELMOD2Q8IZ81 293 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 TMEM156Q8N614 296 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 JSRP1Q96MG2 331 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-202ENST00000535906 OR2A7Q96R45 310 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms