RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 NF1P21359 2839 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 IGLV3-9A0A075B6K5 115 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 FAM183AA6NL82 134 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 PRR23D1E9PI22 279 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 F5H5K5 113 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 ICMTO60725 284 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 LY6G6DO95868 133 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 NGFP01138 241 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 IGHV3-13P01766 116 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 HEXAP06865 529 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 PRR23D2P0DMB1 279 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 MPV17P39210 176 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 ZNF81P51508 661 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 RPS7P62081 194 aaKnown RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 GGTLC2Q14390 218 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 MBNL2Q5VZF2 373 aaKnown RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 SPTSSAQ969W0 71 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 APOBEC3DQ96AK3 386 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 MARS2Q96GW9 593 aaKnown RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 RAB3IPQ96QF0 476 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 ATF6BQ99941 703 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 OR51V1Q9H2C8 321 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 MED20Q9H944 212 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 NTN4Q9HB63 628 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 MRPL22Q9NWU5 206 aaKnown RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 CGGBP1Q9UFW8 167 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-227ENST00000533909 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.57
CAPN1-227ENST00000533909 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 J3QW42 95 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 DBHP09172 617 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 USF1P22415 310 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-227ENST00000533909 GGT2P36268 569 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 LIPAP38571 399 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 SLC6A9P48067 706 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 ENTPD1P49961 510 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 TPTEP56180 551 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 HIST1H3AP68431 136 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 MALLQ13021 153 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 SNAPC1Q16533 368 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 KLHL12Q53G59 568 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 ZNF362Q5T0B9 420 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-227ENST00000533909 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 PLBD1Q6P4A8 553 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 FAHD1Q6P587 224 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 CFAP77Q6ZQR2 320 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 HIST2H3AQ71DI3 136 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 AMIGO2Q86SJ2 522 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 LRTOMTQ8WZ04 291 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 DUS3LQ96G46 650 aaKnown RBP11.45□□□□□ -0.58
CAPN1-227ENST00000533909 DDOQ99489 341 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 COPS4Q9BT78 406 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 NMNAT2Q9BZQ4 307 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 EGLN1Q9GZT9 426 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 SEMA6AQ9H2E6 1030 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 STARD10Q9Y365 291 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 COMMD3-BMI1R4GMX3 469 aa11.45□□□□□ -0.58
CAPN1-227ENST00000533909 ZNF593O00488 134 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 SURF4O15260 269 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 SPRY3O43610 288 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 CLUP10909 449 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 GSTT1P30711 240 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 RPS27P42677 84 aaKnown RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 NR4A2P43354 598 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 CRISP1P54107 249 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 RIPPLY3P57055 190 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 ACTR3P61158 418 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 CCL8P80075 99 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 PPP2R2BQ00005 443 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 LOXL1Q08397 574 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 KPNB1Q14974 876 aaKnown RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 TSTQ16762 297 aaKnown RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 ACSM5Q6NUN0 579 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 ZFP1Q6P2D0 407 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 LYPD4Q6UWN0 246 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 DCXRQ7Z4W1 244 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 ERI1Q8IV48 349 aaKnown RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 ZNF786Q8N393 782 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 PARP8Q8N3A8 854 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 PYDC1Q8WXC3 89 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 RDH5Q92781 318 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 PTP4A1Q93096 173 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 CMBLQ96DG6 245 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 CENPNQ96H22 339 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 INTS14Q96SY0 518 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 HCAR1Q9BXC0 346 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 WDR76Q9H967 626 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 CENPMQ9NSP4 180 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 TVP23BQ9NYZ1 205 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 PTTG3PQ9NZH4 202 aa11.44□□□□□ -0.58
CAPN1-227ENST00000533909 ZNF469Q96JG9 3925 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-227ENST00000533909 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 GLCEO94923 617 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 HPXP02790 462 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 LCATP04180 440 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 TNFSF4P23510 183 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 IGFBP5P24593 272 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 MAGEB1P43366 347 aa11.43□□□□□ -0.58
CAPN1-227ENST00000533909 SLC15A1P46059 708 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms