RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PNMA8CA0A1B0GUJ8 204 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 TRDV1A0A1B0GX56 115 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 OGG1O15527 345 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 ARL6IP5O75915 188 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 RGS9O75916 674 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 RPP14O95059 124 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 MPZL1O95297 269 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 GPANK1O95872 356 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 MPGP29372 298 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 FGF9P31371 208 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 CDAP32320 146 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SOX6P35712 828 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 OR3A2P47893 321 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 GDI2P50395 445 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 CCR9P51686 369 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 TSPO2Q5TGU0 170 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 LRRN1Q6UXK5 716 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 ZNF813Q6ZN06 617 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SLC16A12Q6ZSM3 486 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SEM1Q6ZVN7 128 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SLC16A14Q7RTX9 510 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 CCDC36Q8IYA8 594 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SLC22A24Q8N4F4 322 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 RPRMLQ8N4K4 120 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 OR5AK2Q8NH90 309 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 ST7LQ8TDW4 575 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SMAP2Q8WU79 429 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SPTSSAQ969W0 71 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SLAMF6Q96DU3 332 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 DMRTA2Q96SC8 542 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 TMED9Q9BVK6 235 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 ZNF416Q9BWM5 594 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 TTTY10Q9BZA0 68 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 HDHD2Q9H0R4 259 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 SP140LQ9H930 580 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 CENPMQ9NSP4 180 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 MRM2Q9UI43 246 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 CLEC4AQ9UMR7 237 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 MYO7BQ6PIF6 2116 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 PHF3Q92576 2039 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 ARHGAP21Q5T5U3 1957 aa9.6□□□□□ -0.87
CCDC90B-218ENST00000533761 ZNF879B4DU55 563 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 GATBO75879 557 aaKnown RBP9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 HOXC12P31275 282 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 CEACAM8P31997 349 aaPredicted RBP9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 UGT2B10P36537 528 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 OPRL1P41146 370 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 SLC3A1Q07837 685 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 DBPQ10586 325 aaPredicted RBP9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 ALKBH1Q13686 389 aaKnown RBP9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 DGUOKQ16854 277 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 OR7E24Q6IFN5 339 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 FDX2Q6P4F2 183 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 CD200R1LQ6Q8B3 271 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 PLXDC2Q6UX71 529 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 ZNF704Q6ZNC4 412 aaPredicted RBP9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 ZNF627Q7L945 461 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 LINC00346Q8IVM7 164 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 WDFY1Q8IWB7 410 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 RFLNBQ8N5W9 214 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 ZNF676Q8N7Q3 588 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 CNEP1R1Q8N9A8 125 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 C9orf106Q8NAJ2 232 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 GHSRQ92847 366 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 TMEM203Q969S6 136 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 ATF6BQ99941 703 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 HDHD5Q9BXW7 423 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 C12orf49Q9H741 205 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 EMC7Q9NPA0 242 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 SLC7A10Q9NS82 523 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 GALNT8Q9NY28 637 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 SLCO1C1Q9NYB5 712 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 PLEK2Q9NYT0 353 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 ATPIF1Q9UII2 106 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 SLC5A6Q9Y289 635 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 KLHDC2Q9Y2U9 406 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 ZNF281Q9Y2X9 895 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 LRP12Q9Y561 859 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 TIMM10BQ9Y5J6 103 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 LHFPL6Q9Y693 200 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 R4GMQ9 66 aa9.59□□□□□ -0.87
CCDC90B-218ENST00000533761 TMEM269A0A1B0GVZ9 245 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 ACOD1A6NK06 481 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 LOC110117498-PIK3R3F6TDL0 507 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 FAM229AH3BQW9 127 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 J3QKU1 62 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 PSMD9O00233 223 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 TOXO94900 526 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 ABHD16AO95870 558 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 UBCP0CG48 685 aaKnown RBP9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 TMIGD3P0DMS9 266 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 PLA2G2AP14555 144 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 B4GALT1P15291 398 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 MYL9P24844 172 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 CD79BP40259 229 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 RPS27P42677 84 aaKnown RBP9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 VBP1P61758 197 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 FAPQ12884 760 aa9.58□□□□□ -0.88
CCDC90B-218ENST00000533761 RAB35Q15286 201 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms