RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FZR1Q9UM11 496 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 GRIP1Q9Y3R0 1128 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 PRRC2AP48634 2157 aaKnown RBP10.3□□□□□ -0.76
SSBP3-214ENST00000533209 ARID1AO14497 2285 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 IGLV3-9A0A075B6K5 115 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 H7C417 338 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 DLGAP1O14490 977 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 CLPTM1O96005 669 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 IGHV4-39P01824 125 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 ZNF250P15622 560 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 PEX2P28328 305 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 EVX1P49640 407 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 ATP5J2P56134 94 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 CDC42P60953 191 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 PPP1CBP62140 327 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 SNRPD2P62316 118 aaKnown RBP10.29□□□□□ -0.76
SSBP3-214ENST00000533209 SPATA46Q5T0L3 261 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 NXNL2Q5VZ03 156 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 ARL9Q6T311 187 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 MEPCEQ7L2J0 689 aaKnown RBP10.29□□□□□ -0.76
SSBP3-214ENST00000533209 SHFQ7M4L6 423 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 C1orf174Q8IYL3 243 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 OR8J1Q8NGP2 316 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 FAM81AQ8TBF8 368 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 UBE2FQ969M7 185 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 TRMT61AQ96FX7 289 aaKnown RBP10.29□□□□□ -0.76
SSBP3-214ENST00000533209 MARS2Q96GW9 593 aaKnown RBP10.29□□□□□ -0.76
SSBP3-214ENST00000533209 DCLRE1CQ96SD1 692 aaKnown RBP10.29□□□□□ -0.76
SSBP3-214ENST00000533209 SYT3Q9BQG1 590 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 ABHD6Q9BV23 337 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 OR2J1Q9GZK6 312 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 DCLRE1BQ9H816 532 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 DDX28Q9NUL7 540 aaKnown RBP10.29□□□□□ -0.76
SSBP3-214ENST00000533209 TBCCD1Q9NVR7 557 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 MYEF2Q9P2K5 600 aaKnown RBP10.29□□□□□ -0.76
SSBP3-214ENST00000533209 STARD10Q9Y365 291 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 PMF1-BGLAPU3KQ54 211 aa10.29□□□□□ -0.76
SSBP3-214ENST00000533209 CELSR1Q9NYQ6 3014 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 ITPR3Q14573 2671 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 CASQ2O14958 399 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 ACSM4P0C7M7 580 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 BMP4P12644 408 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 OTX1P32242 354 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 MPV17P39210 176 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 NAA10P41227 235 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 KLF3P57682 345 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 EIF2B1Q14232 305 aaKnown RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 GGTLC2Q14390 218 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 LRRC36Q1X8D7 754 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 TMEM255AQ5JRV8 349 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 LCN1P1Q5VSP4 162 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 UNQ6126/PRO20091Q6UXV3 157 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 COLCA1Q6ZS62 124 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 SLC16A9Q7RTY1 509 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 GALNT4Q8N4A0 578 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 OTOSQ8NHW6 89 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 SYNPRQ8TBG9 265 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 SLC25A40Q8TBP6 338 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 KLF14Q8TD94 323 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 RNF133Q8WVZ7 376 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 SLAMF6Q96DU3 332 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 RDH12Q96NR8 316 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 AMELYQ99218 206 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 POFUT1Q9H488 388 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 H2AFY2Q9P0M6 372 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 NKX1-2Q9UD57 310 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-214ENST00000533209 DUSP13Q9UII6 198 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 KLHDC2Q9Y2U9 406 aa10.28□□□□□ -0.76
SSBP3-214ENST00000533209 SLC22A31A6NKX4 558 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ZNF878C9JN71 531 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 F5H5K5 113 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 H3BSA7 217 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 J3QW42 95 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 M0R135 149 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 IGHV3-13P01766 116 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 MRPL3P09001 348 aaKnown RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ALDH3B1P43353 468 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 RGS6P49758 472 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 PPOXP50336 477 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 HCCSP53701 268 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 SNRPGP62308 76 aaKnown RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 MAD2L1BPQ15013 274 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ZNF718Q3SXZ3 478 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 Q5PR19 223 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 OGFRL1Q5TC84 451 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 MBNL2Q5VZF2 373 aaKnown RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 PRSS57Q6UWY2 283 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 SPNS3Q6ZMD2 512 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 SPATC1Q76KD6 591 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 NAA40Q86UY6 237 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 GID4Q8IVV7 300 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ZCCHC24Q8N2G6 241 aaKnown RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 PACRGLQ8N7B6 248 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ZNF454Q8N9F8 522 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 TRUB1Q8WWH5 349 aaKnown RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 IPCEF1Q8WWN9 437 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ZNF799Q96GE5 643 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ZNF582Q96NG8 517 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 SORCS2Q96PQ0 1159 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms