RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 IFNL4K9M1U5 179 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 IMPA2O14732 288 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 RER1O15258 196 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 DIRAS1O95057 198 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 CFPP27918 469 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 FXYD6P3P58550 94 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-204ENST00000530395 JAZF1Q86VZ6 243 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 MUC20Q8N307 709 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-204ENST00000530395 ATG16L2Q8NAA4 619 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 APOBEC3DQ96AK3 386 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-204ENST00000530395 ERMAPQ96PL5 475 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-204ENST00000530395 COQ7Q99807 217 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 ELAC2Q9BQ52 826 aaKnown RBP17.62■□□□□ 0.41
SMPD1-204ENST00000530395 MYLK2Q9H1R3 596 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 PATZ1Q9HBE1 687 aaKnown RBP17.62■□□□□ 0.41
SMPD1-204ENST00000530395 OPN4Q9UHM6 478 aa17.62■□□□□ 0.41
SMPD1-204ENST00000530395 PPP1R3DO95685 299 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 RENP00797 406 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 FSHBP01225 129 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 DBHP09172 617 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 ZFP36P26651 326 aaKnown RBP17.61■□□□□ 0.41
SMPD1-204ENST00000530395 SLC6A6P31641 620 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 CDKN2AP42771 156 aaKnown RBP17.61■□□□□ 0.41
SMPD1-204ENST00000530395 COMPP49747 757 aaPredicted RBP17.61■□□□□ 0.41
SMPD1-204ENST00000530395 ERFP50548 548 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 ZMYND11Q15326 602 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 FBXW12Q6X9E4 464 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 LRRC28Q86X40 367 aaPredicted RBP17.61■□□□□ 0.41
SMPD1-204ENST00000530395 OR5AS1Q8N127 324 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 RNF148Q8N7C7 305 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 FAM86B1Q8N7N1 296 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 POP5Q969H6 163 aaKnown RBP17.61■□□□□ 0.41
SMPD1-204ENST00000530395 GORASP2Q9H8Y8 452 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 V9GYQ6 96 aa17.61■□□□□ 0.41
SMPD1-204ENST00000530395 GADD45GO95257 159 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 MDH2P40926 338 aaKnown RBP17.6■□□□□ 0.41
SMPD1-204ENST00000530395 SPIBQ01892 262 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 HNRNPA0Q13151 305 aaKnown RBP17.6■□□□□ 0.41
SMPD1-204ENST00000530395 HLXQ14774 488 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-204ENST00000530395 ARMCX4Q5H9R4 360 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 LEG1Q6P5S2 330 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 OR8G5Q8NG78 346 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 OR13G1Q8NGZ3 307 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 MCUR1Q96AQ8 359 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 PYURFQ96I23 114 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 ZNF582Q96NG8 517 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-204ENST00000530395 TSSK2Q96PF2 358 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 SIGLEC11Q96RL6 698 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 FUZQ9BT04 418 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 NTN4Q9HB63 628 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 GCM1Q9NP62 436 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 MAGEL2Q9UJ55 1249 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 POLR3KQ9Y2Y1 108 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-204ENST00000530395 LHFPL6Q9Y693 200 aa17.6■□□□□ 0.41
SMPD1-204ENST00000530395 TMEM89A2RUT3 159 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 GPANK1O95872 356 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 IFNGR2P38484 337 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 SLC6A9P48067 706 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 SRP9P49458 86 aaKnown RBP17.59■□□□□ 0.41
SMPD1-204ENST00000530395 MMP16P51512 607 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 HIST1H3AP68431 136 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 COX10Q12887 443 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 MEP1BQ16820 701 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 RFX4Q33E94 735 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 ESCO2Q56NI9 601 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 HIST2H3PS2Q5TEC6 136 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 OR2T2Q6IF00 324 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 RBMS3Q6XE24 437 aaKnown RBP17.59■□□□□ 0.41
SMPD1-204ENST00000530395 HIST2H3AQ71DI3 136 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 C3orf56Q8N813 242 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 DEFB108BQ8NET1 73 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 OR10AD1Q8NGE0 317 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 ZMYND19Q96E35 227 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-204ENST00000530395 GPA33Q99795 319 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 MRI1Q9BV20 369 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 NSRP1Q9H0G5 558 aaKnown RBP17.59■□□□□ 0.41
SMPD1-204ENST00000530395 OR52D1Q9H346 318 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 OR5V1Q9UGF6 321 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 B9D1Q9UPM9 204 aa17.59■□□□□ 0.41
SMPD1-204ENST00000530395 IGLV1-36A0A0B4J1U3 117 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 A8MXK9 166 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 F5H0A9 414 aaPredicted RBP17.58■□□□□ 0.4
SMPD1-204ENST00000530395 TMEM178BH3BS89 294 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 ARPC3O15145 178 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 OR10H3O60404 316 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 FPR3P25089 353 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 NOS3P29474 1203 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 ZNF154Q13106 437 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 SLC36A3Q495N2 470 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 C22orf15Q8WYQ4 148 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 MEGF10Q96KG7 1140 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 NMNAT3Q96T66 252 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 IFT27Q9BW83 186 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 HCAR1Q9BXC0 346 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 FAM107BQ9H098 131 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 SRA1Q9HD15 236 aaKnown RBP17.58■□□□□ 0.4
SMPD1-204ENST00000530395 MMP26Q9NRE1 261 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 DDX28Q9NUL7 540 aaKnown RBP17.58■□□□□ 0.4
SMPD1-204ENST00000530395 TMCC3Q9ULS5 477 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms