RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 NF1P21359 2839 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 IGLV3-9A0A075B6K5 115 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 FAM183AA6NL82 134 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 PRR23D1E9PI22 279 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 F5H5K5 113 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 ICMTO60725 284 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 LY6G6DO95868 133 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 NGFP01138 241 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 IGHV3-13P01766 116 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 HEXAP06865 529 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 PRR23D2P0DMB1 279 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 MPV17P39210 176 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF81P51508 661 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 RPS7P62081 194 aaKnown RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 GGTLC2Q14390 218 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 MBNL2Q5VZF2 373 aaKnown RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 SPTSSAQ969W0 71 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 APOBEC3DQ96AK3 386 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 MARS2Q96GW9 593 aaKnown RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 RAB3IPQ96QF0 476 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 ATF6BQ99941 703 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 OR51V1Q9H2C8 321 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 MED20Q9H944 212 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 NTN4Q9HB63 628 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 MRPL22Q9NWU5 206 aaKnown RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 CGGBP1Q9UFW8 167 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-209ENST00000527469 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.57
CAPN1-209ENST00000527469 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 J3QW42 95 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 DBHP09172 617 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 USF1P22415 310 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-209ENST00000527469 GGT2P36268 569 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 LIPAP38571 399 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 SLC6A9P48067 706 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 ENTPD1P49961 510 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 TPTEP56180 551 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 HIST1H3AP68431 136 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 MALLQ13021 153 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 SNAPC1Q16533 368 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 KLHL12Q53G59 568 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF362Q5T0B9 420 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-209ENST00000527469 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 PLBD1Q6P4A8 553 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 FAHD1Q6P587 224 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 CFAP77Q6ZQR2 320 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 HIST2H3AQ71DI3 136 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 AMIGO2Q86SJ2 522 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 LRTOMTQ8WZ04 291 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 DUS3LQ96G46 650 aaKnown RBP11.45□□□□□ -0.58
CAPN1-209ENST00000527469 DDOQ99489 341 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 COPS4Q9BT78 406 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 NMNAT2Q9BZQ4 307 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 EGLN1Q9GZT9 426 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 SEMA6AQ9H2E6 1030 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 STARD10Q9Y365 291 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 COMMD3-BMI1R4GMX3 469 aa11.45□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF593O00488 134 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 SURF4O15260 269 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 SPRY3O43610 288 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 CLUP10909 449 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 GSTT1P30711 240 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 RPS27P42677 84 aaKnown RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 NR4A2P43354 598 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 CRISP1P54107 249 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 RIPPLY3P57055 190 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 ACTR3P61158 418 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 CCL8P80075 99 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 PPP2R2BQ00005 443 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 LOXL1Q08397 574 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 KPNB1Q14974 876 aaKnown RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 TSTQ16762 297 aaKnown RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 ACSM5Q6NUN0 579 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 ZFP1Q6P2D0 407 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 LYPD4Q6UWN0 246 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 DCXRQ7Z4W1 244 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 ERI1Q8IV48 349 aaKnown RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF786Q8N393 782 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 PARP8Q8N3A8 854 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 PYDC1Q8WXC3 89 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 RDH5Q92781 318 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 PTP4A1Q93096 173 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 CMBLQ96DG6 245 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 CENPNQ96H22 339 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 INTS14Q96SY0 518 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 HCAR1Q9BXC0 346 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 WDR76Q9H967 626 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 CENPMQ9NSP4 180 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 TVP23BQ9NYZ1 205 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 PTTG3PQ9NZH4 202 aa11.44□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF469Q96JG9 3925 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-209ENST00000527469 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 GLCEO94923 617 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 HPXP02790 462 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 LCATP04180 440 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 TNFSF4P23510 183 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 IGFBP5P24593 272 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 MAGEB1P43366 347 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 SLC15A1P46059 708 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms