RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ARL9Q6T311 187 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 ZNF620Q6ZNG0 422 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 CFAP77Q6ZQR2 320 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 ZBTB46Q86UZ6 589 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 JAZF1Q86VZ6 243 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 LINC00346Q8IVM7 164 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 NPEPL1Q8NDH3 523 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 SDR9C7Q8NEX9 313 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 SLC26A10Q8NG04 563 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 OR9Q2Q8NGE9 314 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 OR52E2Q8NGJ4 325 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 OR8D4Q8NGM9 314 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 OR51F2Q8NH61 342 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 RAB1CQ92928 201 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 PTP4A1Q93096 173 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 NSL1Q96IY1 281 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 BTBD10Q9BSF8 475 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 C19orf24Q9BVV8 132 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 PLA2G12AQ9BZM1 189 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 RPRD1BQ9NQG5 326 aaKnown RBP8.82□□□□□ -1
PRPF40B-204ENST00000527253 MRPL22Q9NWU5 206 aaKnown RBP8.82□□□□□ -1
PRPF40B-204ENST00000527253 PTTG3PQ9NZH4 202 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 ACTR3BQ9P1U1 418 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 TMCC3Q9ULS5 477 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 TANC2Q9HCD6 1990 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 H0YL77 283 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 TNFRSF11BO00300 401 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 BHLHE40O14503 412 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 IDH3BO43837 385 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 RENP00797 406 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 IGHV2-70P01814 119 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 PSKH1P11801 424 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 RAC2P15153 192 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 TUBG1P23258 451 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 ZFP36P26651 326 aaKnown RBP8.81□□□□□ -1
PRPF40B-204ENST00000527253 PYCR1P32322 319 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 MAGEA2P43356 314 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 PRSS12P56730 875 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.81□□□□□ -1
PRPF40B-204ENST00000527253 CLEC12AQ5QGZ9 265 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 OR2T2Q6IF00 324 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 FAHD2BQ6P2I3 314 aaPredicted RBP8.81□□□□□ -1
PRPF40B-204ENST00000527253 FBXW12Q6X9E4 464 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 COLCA1Q6ZS62 124 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 NAA40Q86UY6 237 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 OR5AS1Q8N127 324 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 GJC3Q8NFK1 279 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 OR2Z1Q8NG97 314 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 ITLN1Q8WWA0 313 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 FAHD2AQ96GK7 314 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 DCLRE1CQ96SD1 692 aaKnown RBP8.81□□□□□ -1
PRPF40B-204ENST00000527253 DIRC2Q96SL1 478 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 COQ7Q99807 217 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 REPIN1Q9BWE0 567 aaKnown RBP8.81□□□□□ -1
PRPF40B-204ENST00000527253 TRIM15Q9C019 465 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 EGLN1Q9GZT9 426 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 METTL17Q9H7H0 456 aaPredicted RBP8.81□□□□□ -1
PRPF40B-204ENST00000527253 PNRC2Q9NPJ4 139 aaKnown RBP8.81□□□□□ -1
PRPF40B-204ENST00000527253 TUBG2Q9NRH3 451 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 NDE1Q9NXR1 346 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 CGGBP1Q9UFW8 167 aaPredicted RBP8.81□□□□□ -1
PRPF40B-204ENST00000527253 ATPIF1Q9UII2 106 aa8.81□□□□□ -1
PRPF40B-204ENST00000527253 LOC105371242A0A075B767 164 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 TRAV20A0A0B4J274 112 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 C5orf63A6NC05 138 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 KRT36O76013 467 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 VENTXO95231 258 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 SBK2P0C263 348 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 ACSM4P0C7M7 580 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 IFNGR2P38484 337 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 RPS27P42677 84 aaKnown RBP8.8□□□□□ -1
PRPF40B-204ENST00000527253 LCN8Q6JVE9 175 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 PGM2L1Q6PCE3 622 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 DNM1P34Q6PK57 102 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 LYPD4Q6UWN0 246 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 ZNF283Q8N7M2 679 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 CYB561A3Q8NBI2 242 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 OR10S1Q8NGN2 331 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 OR4Q3Q8NH05 313 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 APOBEC3DQ96AK3 386 aaPredicted RBP8.8□□□□□ -1
PRPF40B-204ENST00000527253 TIMD4Q96H15 378 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 MAP6Q96JE9 813 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 CLPTM1LQ96KA5 538 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 SIGLEC11Q96RL6 698 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 C1QTNF5Q9BXJ0 243 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 TMPRSS13Q9BYE2 586 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 HDHD2Q9H0R4 259 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 WDR76Q9H967 626 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 TMEM106BQ9NUM4 274 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 IL20Q9NYY1 176 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 CYB5R1Q9UHQ9 305 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 POLR1DQ9Y2S0 133 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 NPTNQ9Y639 398 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 CDH10Q9Y6N8 788 aa8.8□□□□□ -1
PRPF40B-204ENST00000527253 ISPDA4D126 451 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 TVP23AA6NH52 213 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 J3QW42 95 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 MLNRO43193 412 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 TCF21O43680 179 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 CCNB2O95067 398 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms