RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	OR51L1	Q8NGJ5	315 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR2G2	Q8NGZ5	317 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR5AK2	Q8NH90	309 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	GPR148	Q8TDV2	347 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	GPX8	Q8TED1	209 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	THRSP	Q92748	146 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	C4orf45	Q96LM5	186 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033		Q96M85	177 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR6C1	Q96RD1	312 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	SMAD5	Q99717	465 aa	Known RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	MS4A7	Q9GZW8	240 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	SLITRK2	Q9H156	845 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	SLC25A32	Q9H2D1	315 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	SRMS	Q9H3Y6	488 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF768	Q9H5H4	540 aa	Known RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	BARX1	Q9HBU1	254 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	MED11	Q9P086	117 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	TUBD1	Q9UJT1	453 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	TMEM184B	Q9Y519	407 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	CLDN16	Q9Y5I7	305 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	SPACA6	W5XKT8	324 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7	□□□□□ -1.29
SPIDR-223	ENST00000524033		A0A0J9YY10	115 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	UBE2QL1	A1L167	161 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	GGT3P	A6NGU5	568 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	SERINC4	A6NH21	518 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	TMEM212	A6NML5	194 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	MPTX1	A8MV57	137 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	ATP6V1G2-DDX39B	F2Z307	99 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	LDLRAD4	O15165	306 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	CDC123	O75794	336 aa	Predicted RBP	7	□□□□□ -1.29
SPIDR-223	ENST00000524033	SERPINI2	O75830	405 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	KDM4B	O94953	1096 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	SIX6	O95475	246 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	WNT11	O96014	354 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	CD8A	P01732	235 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	CLPS	P04118	112 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	TACSTD2	P09758	323 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	H2AFB1	P0C5Y9	115 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF735	P0CB33	412 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	AKAIN1	P0CW23	69 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	SLC25A4	P12235	298 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	FST	P19883	344 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	TCN2	P20062	427 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	SDHA	P31040	664 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	GATA4	P43694	442 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	CAPZB	P47756	277 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	EGR3	Q06889	387 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	STX4	Q12846	297 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	BTN1A1	Q13410	526 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	ETFDH	Q16134	617 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF74	Q16587	644 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	DEFB109B	Q30KR1	87 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	NDUFAF6	Q330K2	333 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	PCGF3	Q3KNV8	242 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	GXYLT1	Q4G148	440 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	EMC4	Q5J8M3	183 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	LIPN	Q5VXI9	398 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	ASPHD2	Q6ICH7	369 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	LEG1	Q6P5S2	330 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	CFAP77	Q6ZQR2	320 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	KRT77	Q7Z794	578 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF433	Q8N7K0	673 aa	Predicted RBP	7	□□□□□ -1.29
SPIDR-223	ENST00000524033	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7	□□□□□ -1.29
SPIDR-223	ENST00000524033	CLEC1A	Q8NC01	280 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	C7orf57	Q8NEG2	295 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR5T3	Q8NGG3	340 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR4D10	Q8NGI6	311 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR10Z1	Q8NGY1	313 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR10AC1	Q8NH08	325 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	COQ8A	Q8NI60	647 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	RIT1	Q92963	219 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	FBXW5	Q969U6	566 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	GINS4	Q9BRT9	223 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	DNTTIP1	Q9H147	329 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	TCF7L1	Q9HCS4	588 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	PDE7B	Q9NP56	450 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	RASL12	Q9NYN1	266 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	EPHA6	Q9UF33	1036 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	CYB5R1	Q9UHQ9	305 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF107	Q9UII5	783 aa	Predicted RBP	7	□□□□□ -1.29
SPIDR-223	ENST00000524033	GPR160	Q9UJ42	338 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	PADI1	Q9ULC6	663 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	DTX4	Q9Y2E6	619 aa		7	□□□□□ -1.29
SPIDR-223	ENST00000524033	TDRD6	O60522	2096 aa	Known RBP	7	□□□□□ -1.29
SPIDR-223	ENST00000524033	COL27A1	Q8IZC6	1860 aa	Predicted RBP	7	□□□□□ -1.29
SPIDR-223	ENST00000524033	HECTD1	Q9ULT8	2610 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	FXYD6-FXYD2	A0A087WZ82	144 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	IGHV5-51	A0A0C4DH38	117 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	TCRBV16S1A1N1	A0A5B0	115 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	TMEM72	A0PK05	275 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	SLC17A2	O00624	439 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	GOSR2	O14653	212 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	PHYH	O14832	338 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	ARPC5	O15511	151 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	SRPX2	O60687	465 aa	Predicted RBP	6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	PRAMEF2	O60811	474 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	RBBP9	O75884	186 aa		6.99	□□□□□ -1.29
SPIDR-223	ENST00000524033	AKR7A3	O95154	331 aa		6.99	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms