RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NKAIN4Q8IVV8 208 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 OR8G5Q8NG78 346 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 GPR32P1Q8NGA4 272 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 OR13G1Q8NGZ3 307 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 SLC26A7Q8TE54 656 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 AENQ8WTP8 325 aaKnown RBP9.61□□□□□ -0.87
SDCBP-211ENST00000523441 TMEM255BQ8WV15 326 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 LRTOMTQ8WZ04 291 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 PTP4A1Q93096 173 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 NMD3Q96D46 503 aaKnown RBP9.61□□□□□ -0.87
SDCBP-211ENST00000523441 SGTBQ96EQ0 304 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 ZNF582Q96NG8 517 aaPredicted RBP9.61□□□□□ -0.87
SDCBP-211ENST00000523441 C16orf95Q9H693 158 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 SMURF1Q9HCE7 757 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 C20orf141Q9NUB4 165 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 TBCCD1Q9NVR7 557 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 NECAP2Q9NVZ3 263 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 VAPAQ9P0L0 249 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 ONECUT1Q9UBC0 465 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 HAO1Q9UJM8 370 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 M0QX08 132 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 SGCEO43556 437 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 FAM20BO75063 409 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 HOXB9P17482 250 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-211ENST00000523441 TNFRSF1BP20333 461 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 MSR1P21757 451 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 FPR3P25089 353 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 ZNF133P52736 654 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-211ENST00000523441 MPP2Q14168 576 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 CYP51A1Q16850 503 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 ALG10Q5BKT4 473 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 PAGE3Q5JUK9 113 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 CD276Q5ZPR3 534 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 VMO1Q7Z5L0 202 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 LDLRAD3Q86YD5 345 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 KIRREL3Q8IZU9 778 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 FGFRL1Q8N441 504 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 PNKDQ8N490 385 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 PNLDC1Q8NA58 520 aaKnown RBP9.6□□□□□ -0.87
SDCBP-211ENST00000523441 OR11L1Q8NGX0 322 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 PHF21AQ96BD5 680 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 SEPHS2Q99611 448 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 PRSS27Q9BQR3 290 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 SMURF2Q9HAU4 748 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 SIRT7Q9NRC8 400 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 SDR39U1Q9NRG7 319 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-211ENST00000523441 VPREB3Q9UKI3 123 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 NOTCH3Q9UM47 2321 aa9.6□□□□□ -0.87
SDCBP-211ENST00000523441 TENM3Q9P273 2699 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 LOC100653049A0A140TA62 436 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 EVPLLA8MZ36 301 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 CENPBD1B2RD01 187 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 FBP2O00757 339 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 GPR37O15354 613 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 RGS16O15492 202 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-211ENST00000523441 OR10H3O60404 316 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 ICMTO60725 284 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 KRT34O76011 436 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 GYPAP02724 150 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 MT-ND1P03886 318 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 RAC2P15153 192 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 TAS2R41P59536 307 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 CTXN1P60606 82 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 STX1BP61266 288 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 KLRD1Q13241 179 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 MPPED2Q15777 294 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 BTN2A1Q7KYR7 527 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 KLHDC1Q8N7A1 406 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 C10orf82Q8WW14 230 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 ROPN1BQ9BZX4 212 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-211ENST00000523441 SIRPDQ9H106 197 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 TXNIPQ9H3M7 391 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 ROPN1Q9HAT0 212 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-211ENST00000523441 POLE4Q9NR33 117 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 TMEM100Q9NV29 134 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 CCDC167Q9P0B6 97 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 STX18Q9P2W9 335 aaKnown RBP9.59□□□□□ -0.87
SDCBP-211ENST00000523441 USH1CQ9Y6N9 552 aa9.59□□□□□ -0.87
SDCBP-211ENST00000523441 IGHV3OR15-7A0A075B7D8 119 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 GMNCA6NCL1 334 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 TSPAN9O75954 239 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 PAHP00439 452 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 FBP1P09467 338 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 NR2C1P13056 603 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 PPIBP23284 216 aaKnown RBP9.58□□□□□ -0.88
SDCBP-211ENST00000523441 CPT2P23786 658 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 TGFBR2P37173 567 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 RPL27P61353 136 aaKnown RBP9.58□□□□□ -0.88
SDCBP-211ENST00000523441 SCRN3Q0VDG4 424 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 COX10Q12887 443 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 FOXB2Q5VYV0 432 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 MAVSQ7Z434 540 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 R3HDM4Q96D70 268 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 MPP4Q96JB8 637 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 MMP28Q9H239 520 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 TMEM38AQ9H6F2 299 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 SH3GLB1Q9Y371 365 aa9.58□□□□□ -0.88
SDCBP-211ENST00000523441 TRAV27A0A087WT01 109 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms