RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 REEP3Q6NUK4 255 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 METAP1DQ6UB28 335 aaPredicted RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 NPSR1Q6W5P4 371 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SLC16A14Q7RTX9 510 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SLC16A13Q7RTY0 426 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 LGI3Q8N145 548 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OSR2Q8N2R0 312 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 METTL13Q8N6R0 699 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 C11orf72Q8NBR9 251 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR4K5Q8NGD3 323 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR10AD1Q8NGE0 317 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR4A4PQ8NGN8 299 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR6N1Q8NGY5 312 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR5B3Q8NH48 314 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 LINC01560Q8TB33 94 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 TMEM230Q96A57 120 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 PTX4Q96A99 478 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 DCPSQ96C86 337 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 FLYWCH2Q96CP2 140 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 L3HYPDHQ96EM0 354 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 RNF157Q96PX1 679 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR5B12Q96R08 314 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 TIMM17AQ99595 171 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 DOK1Q99704 481 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 MICU1Q9BPX6 476 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SPNS1Q9H2V7 528 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR52D1Q9H346 318 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 TMEM9BQ9NQ34 198 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 NMRK1Q9NWW6 199 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 CCDC59Q9P031 241 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 TSSC4Q9Y5U2 329 aaPredicted RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 PALLDQ8WX93 1383 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ZNF407Q9C0G0 2248 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 THADAQ6YHU6 1953 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 SMCO3A2RU48 225 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 A6NDN8 102 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 OR2AG2A6NM03 316 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 NCBP2LA6PVI3 153 aaKnown RBP1.22□□□□□ -2.21
PCM1-217ENST00000522998 ZNF850A8MQ14 1090 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 A8MUU9 505 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 H0YJW9 148 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 RAD51CO43502 376 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 REM1O75628 298 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ARG1P05089 322 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ERGP11308 486 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ZNF14P17017 642 aaPredicted RBP1.22□□□□□ -2.21
PCM1-217ENST00000522998 U2AF2P26368 475 aaKnown RBP eCLIP1.22□□□□□ -2.214e-7■■■□□ 17.3
PCM1-217ENST00000522998 P2RX1P51575 399 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 VSX2P58304 361 aaPredicted RBP1.22□□□□□ -2.21
PCM1-217ENST00000522998 PPP1CBP62140 327 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 CACNG7P62955 275 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 SELENBP1Q13228 472 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 MRPL23Q16540 153 aaKnown RBP1.22□□□□□ -2.21
PCM1-217ENST00000522998 SOHLH1Q5JUK2 328 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 DNLZQ5SXM8 178 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 CCDC183Q5T5S1 534 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 PRAMEF20Q5VT98 475 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 GPR107Q5VW38 600 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 CARD17Q5XLA6 110 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 SAXO2Q658L1 398 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 UNQ9165/PRO28630Q6UXU0 137 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 MBOAT1Q6ZNC8 495 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 CMC1Q7Z7K0 106 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 MYOCDQ8IZQ8 938 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ZFP41Q8N8Y5 198 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 CHST4Q8NCG5 386 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 OR52P1PQ8NH57 321 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 OR5K2Q8NHB8 316 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 LILRB4Q8NHJ6 448 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 NUBPLQ8TB37 319 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 CIRBP-AS1Q8TBR5 109 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ZNF488Q96MN9 340 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 COL21A1Q96P44 957 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 SAMD10Q9BYL1 202 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ULBP2Q9BZM5 246 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 C1orf198Q9H425 327 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ANKRA2Q9H9E1 313 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 ZDHHC4Q9NPG8 344 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 SAMSN1Q9NSI8 373 aaKnown RBP1.22□□□□□ -2.21
PCM1-217ENST00000522998 PITPNC1Q9UKF7 332 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 SLC17A4Q9Y2C5 497 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 HYOU1Q9Y4L1 999 aa1.22□□□□□ -2.21
PCM1-217ENST00000522998 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 BAZ2AQ9UIF9 1905 aaKnown RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 FLOT1O75955 427 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 SEMA3DO95025 777 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 AGTP01019 485 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 OR8U9P0C7N5 309 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 GGT1P19440 569 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 SYKP43405 635 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 KIR3DL2P43630 455 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 SLC11A1P49279 550 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 MRPL19P49406 292 aaKnown RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 CRISP1P54107 249 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 PRRX1P54821 245 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 GFERP55789 205 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 CRADDP78560 199 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 HMGN5P82970 282 aaKnown RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 SEMG2Q02383 582 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 RCAN2Q14206 197 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms