RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ARSKQ6UWY0 536 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF836Q6ZNA1 936 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 CCDC121Q6ZUS5 278 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 TMPRSS11FQ6ZWK6 438 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF550Q7Z398 422 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 GRAMD2AQ8IUY3 354 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 EID3Q8N140 333 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 GTPBP8Q8N3Z3 284 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RNF148Q8N7C7 305 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 NKAIN3Q8N8D7 197 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 SMYD1Q8NB12 490 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 FAM83FQ8NEG4 500 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 GPR32P1Q8NGA4 272 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 OR52E4Q8NGH9 312 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 OR2AJ1Q8NGZ0 328 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 GPR119Q8TDV5 335 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 SLC26A7Q8TE54 656 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RNF128Q8TEB7 428 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RASSF5Q8WWW0 418 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM234Q8WY98 164 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 LZICQ8WZA0 190 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 ST8SIA1Q92185 356 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 PROX1Q92786 737 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 FAM162AQ96A26 154 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 TAMM41Q96BW9 452 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 SH3YL1Q96HL8 342 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 NSMCE2Q96MF7 247 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RNF145Q96MT1 663 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 GPR137Q96N19 417 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RAB3IPQ96QF0 476 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RBM4BQ9BQ04 359 aaKnown RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 KLHDC3Q9BQ90 382 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RSPO3Q9BXY4 272 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 DPAGT1Q9H3H5 408 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 PTGES2Q9H7Z7 377 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 ZDHHC11Q9H8X9 412 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 GORASP2Q9H8Y8 452 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 EXOSC3Q9NQT5 275 aaKnown RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 ACER3Q9NUN7 267 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 DCAF13Q9NV06 445 aaKnown RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 MED17Q9NVC6 651 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 KLHL28Q9NXS3 571 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 ACTR3BQ9P1U1 418 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 RHCGQ9UBD6 479 aa2.74□□□□□ -1.97
VPS13B-209ENST00000521559 SNRNP200O75643 2136 aaKnown RBP2.74□□□□□ -1.97
VPS13B-209ENST00000521559 MYO15AQ9UKN7 3530 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 SEC16AO15027 2179 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 IGLV9-49A0A0B4J1Y8 123 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 A0A1B0GTH9 108 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 A0A1B0GVY2 172 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 A0A1W2PN81 502 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 ARPC2O15144 300 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 ATP6V0E1O15342 81 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 EFNA2O43921 213 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 GMFGO60234 142 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 CDC40O60508 579 aaKnown RBP eCLIP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 TPST2O60704 377 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 FMO6PO60774 539 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 PDE5AO76074 875 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 STAMBPO95630 424 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 NUDT14O95848 222 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 SERPINA1P01009 418 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 NGFP01138 241 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 OPN1SWP03999 348 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 RAF1P04049 648 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 PRB1P04280 392 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 HOXD4P09016 255 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 DANCRP0C864 163 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 GKN3PP0CG01 181 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 GP1BBP13224 206 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 PRG2P13727 222 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 UQCRBP14927 111 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 CPN1P15169 458 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 TCN1P20061 433 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 ACHEP22303 614 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 PTAFRP25105 342 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 FKBP2P26885 142 aaKnown RBP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 CHRNA7P36544 502 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 SLC1A3P43003 542 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 MAGEA5P43359 124 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 IDH2P48735 452 aaKnown RBP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 STARP49675 285 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 CCR4P51679 360 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF136P52737 540 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 TPD52P55327 224 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 RGS8P57771 180 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 NCALDP61601 193 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 COPZ1P61923 177 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 HOXC5Q00444 222 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 MS4A2Q01362 244 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 RBPJQ06330 500 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 TOMM34Q15785 309 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-209ENST00000521559 NPTX1Q15818 432 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 IGFBP7Q16270 282 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 NRF1Q16656 503 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 PLPPR5Q32ZL2 321 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 GLIPR1L2Q4G1C9 344 aa2.73□□□□□ -1.97
VPS13B-209ENST00000521559 LRRC23Q53EV4 343 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms