RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 TMEM106BQ9NUM4 274 aa17.36■□□□□ 0.37
SNHG6-203ENST00000520944 IL19Q9UHD0 177 aa17.36■□□□□ 0.37
SNHG6-203ENST00000520944 B9D1Q9UPM9 204 aa17.36■□□□□ 0.37
SNHG6-203ENST00000520944 ARPC3O15145 178 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 DCTN3O75935 186 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 GPANK1O95872 356 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 DBHP09172 617 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 RRM2P31350 389 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 GNGT1P63211 74 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 SPATS1Q496A3 300 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 SPRNQ5BIV9 151 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 OR6V1Q8N148 313 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 ATG16L2Q8NAA4 619 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 OR4K13Q8NH42 304 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 GNPDA2Q8TDQ7 276 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 APOBEC3DQ96AK3 386 aaPredicted RBP17.35■□□□□ 0.37
SNHG6-203ENST00000520944 COQ7Q99807 217 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 HDHD2Q9H0R4 259 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 ARL8BQ9NVJ2 186 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 PTTG3PQ9NZH4 202 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 PPP1R3CQ9UQK1 317 aa17.35■□□□□ 0.37
SNHG6-203ENST00000520944 LOC105371242A0A075B767 164 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 IGLV1-36A0A0B4J1U3 117 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 HAX1O00165 279 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 DCTN6O00399 190 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 IDH3BO43837 385 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 HIST1H1CP16403 213 aaKnown RBP17.34■□□□□ 0.37
SNHG6-203ENST00000520944 MNAT1P51948 309 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 LCN2P80188 198 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 HLXQ14774 488 aaPredicted RBP17.34■□□□□ 0.37
SNHG6-203ENST00000520944 MEP1BQ16820 701 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 SLC36A3Q495N2 470 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 SLC27A4Q6P1M0 643 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 Q6ZR03 302 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 ZDHHC21Q8IVQ6 265 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 DEFB107AQ8IZN7 70 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 OR5AS1Q8N127 324 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 KLHL36Q8N4N3 616 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 SPICQ8N5J4 248 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 ZNF582Q96NG8 517 aaPredicted RBP17.34■□□□□ 0.37
SNHG6-203ENST00000520944 RPRD1BQ9NQG5 326 aaKnown RBP17.34■□□□□ 0.37
SNHG6-203ENST00000520944 LHFPL6Q9Y693 200 aa17.34■□□□□ 0.37
SNHG6-203ENST00000520944 KRT36O76013 467 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 AVPP01185 164 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 HLA-DQA2P01906 255 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 GYS2P54840 703 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 HIST1H3AP68431 136 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 COX10Q12887 443 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 TSPAN31Q12999 210 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 HIST2H3PS2Q5TEC6 136 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 CORO6Q6QEF8 472 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 FBXW12Q6X9E4 464 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 C1orf229Q6ZS94 237 aaPredicted RBP17.33■□□□□ 0.36
SNHG6-203ENST00000520944 HIST2H3AQ71DI3 136 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 PIGWQ7Z7B1 504 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 ZNF283Q8N7M2 679 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 OR2AJ1Q8NGZ0 328 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 NANPQ8TBE9 248 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 ITLN1Q8WWA0 313 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 OR2V2Q96R30 315 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 TMPRSS13Q9BYE2 586 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 C7orf69Q9H7B7 122 aa17.33■□□□□ 0.36
SNHG6-203ENST00000520944 FOXH1O75593 365 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 VENTXO95231 258 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 IGHV2-70P01814 119 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 EPHA1P21709 976 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 ERFP50548 548 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 OR2T2Q6IF00 324 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 C1QL2Q7Z5L3 287 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 SLC26A10Q8NG04 563 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 OR8G5Q8NG78 346 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 OR13G1Q8NGZ3 307 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 ZFAND2BQ8WV99 257 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 PITX2Q99697 317 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 DCAF16Q9NXF7 216 aa17.32■□□□□ 0.36
SNHG6-203ENST00000520944 IFNL4K9M1U5 179 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 RGS9O75916 674 aaPredicted RBP17.31■□□□□ 0.36
SNHG6-203ENST00000520944 GSSP48637 474 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 BTG1P62324 171 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 ECH1Q13011 328 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 TMEM155Q4W5P6 130 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 SLC35F1Q5T1Q4 408 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 ZBTB46Q86UZ6 589 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 LRRC28Q86X40 367 aaPredicted RBP17.31■□□□□ 0.36
SNHG6-203ENST00000520944 LINC00471Q8N535 108 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 SDR9C7Q8NEX9 313 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 OR52L1Q8NGH7 329 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 OR52E2Q8NGJ4 325 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 HCAR1Q9BXC0 346 aa17.31■□□□□ 0.36
SNHG6-203ENST00000520944 OR6C68A6NDL8 312 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 F5H5K5 113 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 TNFRSF11BO00300 401 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 SELEP16581 610 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 ADRA2CP18825 462 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 SRP9P49458 86 aaKnown RBP17.3■□□□□ 0.36
SNHG6-203ENST00000520944 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNHG6-203ENST00000520944 CLEC12AQ5QGZ9 265 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 SLC18B1Q6NT16 456 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 RPL13AP3Q6NVV1 102 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 PGBD2Q6P3X8 592 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms