RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PATE4P0C8F1 98 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 RAD52P43351 418 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 TIGD3Q6B0B8 471 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 SPINK14Q6IE38 97 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 MRPL14Q6P1L8 145 aaKnown RBP10.12□□□□□ -0.79
CLK4-206ENST00000520878 ZNF584Q8IVC4 421 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 GPR137CQ8N3F9 429 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 OR51S1Q8NGJ8 323 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 FAM210AQ96ND0 272 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 GFI1Q99684 422 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 MRI1Q9BV20 369 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 BANF2Q9H503 90 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 TCFL5Q9UL49 500 aa10.12□□□□□ -0.79
CLK4-206ENST00000520878 ZFHX2Q9C0A1 2572 aaPredicted RBP10.12□□□□□ -0.79
CLK4-206ENST00000520878 TMEM221A6NGB7 291 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 M0R296 226 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 SIX6O95475 246 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 UMODP07911 640 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 VAMP1P23763 118 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ZNF121P58317 390 aaPredicted RBP10.11□□□□□ -0.79
CLK4-206ENST00000520878 LINC00303Q3SY05 128 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 SLC36A2Q495M3 483 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 POC1BQ8TC44 478 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 CASTOR1Q8WTX7 329 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ZNF385AQ96PM9 386 aaKnown RBP10.11□□□□□ -0.79
CLK4-206ENST00000520878 SNX18Q96RF0 628 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ACTR6Q9GZN1 396 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLK4-206ENST00000520878 LRFN1Q9P244 771 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ETV7Q9Y603 341 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 GGT3PA6NGU5 568 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 CREBL2O60519 120 aaPredicted RBP10.11□□□□□ -0.79
CLK4-206ENST00000520878 CRTAPO75718 401 aaPredicted RBP10.11□□□□□ -0.79
CLK4-206ENST00000520878 LCATP04180 440 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 CD3DP04234 171 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ALDOBP05062 364 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ZNF24P17028 368 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 CXCL3P19876 107 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 CX3CR1P49238 355 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 MC2RQ01718 297 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 TRA2AQ13595 282 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLK4-206ENST00000520878 ALKBH2Q6NS38 261 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 NOXO1Q8NFA2 376 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 CT55Q8WUE5 264 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ALKBH3Q96Q83 286 aaPredicted RBP10.11□□□□□ -0.79
CLK4-206ENST00000520878 KCNK17Q96T54 332 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 PIGQQ9BRB3 760 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 HDGFL3Q9Y3E1 203 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 FER1L5A0AVI2 2057 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ZNF878C9JN71 531 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 SLC17A2O00624 439 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 IGF2P01344 180 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ACSM4P0C7M7 580 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 UBCP0CG48 685 aaKnown RBP10.11□□□□□ -0.79
CLK4-206ENST00000520878 NR2C1P13056 603 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ICAM2P13598 275 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ZNF93P35789 620 aaPredicted RBP10.11□□□□□ -0.79
CLK4-206ENST00000520878 LRRC37A5PQ49AS3 106 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ACER2Q5QJU3 275 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 FAM198BQ6UWH4 519 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 BTN2A1Q7KYR7 527 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 MCEMP1Q8IX19 187 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 OR8H3Q8N146 312 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 OR52B4Q8NGK2 314 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 PNPLA2Q96AD5 504 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 ABI3Q9P2A4 366 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 SPTA1P02549 2419 aa10.11□□□□□ -0.79
CLK4-206ENST00000520878 FXYD6-FXYD2A0A087WZ82 144 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 COX6A1P12074 109 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 ACHEP22303 614 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 GNG2P59768 71 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 PMPCAQ10713 525 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 CDK10Q15131 360 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 ST3GAL2Q16842 350 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 PLA1AQ53H76 456 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 STPG1Q5TH74 334 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 CFAP77Q6ZQR2 320 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 AAED1Q7RTV5 226 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 OR52N4Q8NGI2 321 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 OR6M1Q8NGM8 313 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 DPCDQ9BVM2 203 aaPredicted RBP10.1□□□□□ -0.79
CLK4-206ENST00000520878 ZNF416Q9BWM5 594 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 FXYD6Q9H0Q3 95 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 CTAG2O75638 210 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 CBR3O75828 277 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 GAAP10253 952 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 SELENOPP49908 381 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 NKAPLQ5M9Q1 402 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 ZNF684Q5T5D7 378 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 Q6ZTK2 550 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 LRRTM1Q86UE6 522 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 CATSPERDQ86XM0 798 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 PNLDC1Q8NA58 520 aaKnown RBP10.1□□□□□ -0.79
CLK4-206ENST00000520878 OR10K1Q8NGX5 313 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 HYLS1Q96M11 299 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 OR2M2Q96R28 347 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 SLC6A7Q99884 636 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 IER2Q9BTL4 223 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 WDR54Q9H977 334 aa10.1□□□□□ -0.79
CLK4-206ENST00000520878 GLTPQ9NZD2 209 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms